Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02204 ATGAACCTGTTGTCAAGCTTCTTTAGACACCAAAACTCTCACCCTTTCACCCATTTCCTCTTTCTCCAAAGAAGATGGAAGAAACCAACAATCTCTGCACAAACCCGTTTAGAAGACAAGGCTCGAGACACTCACCTCGATAACCTTGTATCCTGCATGTCCAAGCTCAGACTCATCCTTGGAATCCACACCTTCATGTCTTCCCGGAAGCGTGGAACCTTCGTTTCCCTGCAGCTCATGTCCCGCTGGAGGAACATCCTTGGACTCAACATCCCTATTGGCTCCTTCCTCCGCAAGTACCCACACATTTTCGAGGTGTTCCTTCACCCCGTAAGGAAGAACCCGTGTTGCAGGGTCACAAGGAAGATGAAGGAGCTGGTCCTAATGGAACGTGTTGTTGTGAGGAAAAATGAGTTGGAGGTTGTGAAGAGGGTGAAGCAGCTTCTTATGATGTCAGTGAATGGCACACTTCGTGTTCATGCTTTGAGGATGATTAAAAGGGAACTTGGTTTGCCTGATGATTTCCGAGACTCAATTTTGGGAAAGCATAGTGATGACTTCAGGTTGGTTGGCTTGGAGGTTGTGGAATTGGTTTGTGAAAATGGTGAATTTGGGGTTGTTGCTGAAGTTGAGAAATGGAGAGAAAAAGAATACACTGAAAAATGGTTGAGTGAGTTTGAGACCAAGTTTGCATTCCCAATTAACCTCCCAACAGGTTTCAAGATTGAGAAAGGATTTAGAGAGAGATTGAAGAATTGGCAGAGGCTTCCTTATGCTAAGCCTTATGAGAGCAAAGAGGCCATAAGGGTTAGAAACTCGGGCGGTATTGATCGGTATGAGAAGAGAGCTGTTGCTGTTCTTCACGAGCTTTTGAGCATGACTGTCGAGAAGATGGTTCATGTTGATCATTTGGTGCATTTTCGTAGGGATTTCGCAATCGAGGTTAATCTGCGCGAGTTGTTGCTGAAGCACCCTGGGATATTCTACATATCCACAAAGGGGAAAACTCAGACTGTTATTCTTAGGGAGGTATATAGGAAGGGGAGTTTGATTGAGCCTAATCCTGTTTACACTGCTCGGAGGAACATGTTGGAGCTTGTGTTGTTGCAGCATAGGAAGACAAAACAAATGGTAGATTTTGATGAACCGAGTAAAGGGGGTAACAGTGTGGTATGTAAAGCGGATGAAGGAGTTAAAAGAGAAGGAGATTGGGTGATTCCATTCTTGGAGAGTTGCGTGGATAAGGAGGTAGTTTCTTGCTGCAAAATGTTGACTGCCCCTAGTGGAAAAAGGAGCCGACCCTTCTTGCCTGAAGGCATGCTGCCACTTACAGTTGCGGTTGCTGTTGCAGTTGTTTTGGAAATGCTGAGAATTGCAGTAAAAGGCACATGA 1392 0.4519 MNLLSSFFRHQNSHPFTHFLFLQRRWKKPTISAQTRLEDKARDTHLDNLVSCMSKLRLILGIHTFMSSRKRGTFVSLQLMSRWRNILGLNIPIGSFLRKYPHIFEVFLHPVRKNPCCRVTRKMKELVLMERVVVRKNELEVVKRVKQLLMMSVNGTLRVHALRMIKRELGLPDDFRDSILGKHSDDFRLVGLEVVELVCENGEFGVVAEVEKWREKEYTEKWLSEFETKFAFPINLPTGFKIEKGFRERLKNWQRLPYAKPYESKEAIRVRNSGGIDRYEKRAVAVLHELLSMTVEKMVHVDHLVHFRRDFAIEVNLRELLLKHPGIFYISTKGKTQTVILREVYRKGSLIEPNPVYTARRNMLELVLLQHRKTKQMVDFDEPSKGGNSVVCKADEGVKREGDWVIPFLESCVDKEVVSCCKMLTAPSGKRSRPFLPEGMLPLTVAVAVAVVLEMLRIAVKGT 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02204 463 Pfam Plant organelle RNA recognition domain 42 371 IPR021099 GO:0003723
Aip06g02204 463 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 15 417 IPR045040 GO:0003723
Aip06g02204 463 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 15 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02204 Aip-Chr6 100043147 100045026 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02204 - - vun:114194999 583.178