LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip06g02132	ATGGAGATAGAGAAGAATGTTACAAAGGGCAATGGGGAAAGCGTTGCAGAAGAAGAGAGAAACAAAAATATGAAGAGGAAGCAGTGCCGTCAAGGAGGCATAAGAACTTTACCTTTCATCCTTGCAAATGAAGTGTGTGATAGATTTGCGGTGGCTGGGTTCTCTGGCAACTTGATAAGTTACCTGACACAAGTGATGAACATGCCATTGGTAGCTGCCTCCAACACACTCACAAACTTTGCTGGAACATCAAGCTTCACTCCTCTCCTTGGTGCTATCATTGCTGAGTCTTTTGCTGGCCGCTTTTGGACCATTACTATTGCTTCTCTCATCTATGAACTGGGAATGATTAGCATGACATTATCAGCGATACTTCCACATTTTCGTCCACCACCATGCCCAAAACAAGTGAATTGCCAAGAAGCCACATCCTCACAGCTATGGATATTATACATGTCTCTACTCCTCACATCTCTTGGCTCAGGTGGCATTAGACCCTGTGTGGTGCCCTTTTCAGGAGACCAATTTGACATGTCCAAAAAGGGTGTGGAATCCAGAAAATGGAACCTGTTCAATTGGTATTTTTTCAGCATGGGCTTTGCTTCACTAAGTGCTTTGACAGTTGTGGTTTACATCCAAGACAACATGGGGTGGGGTTGGGGACTTGGGATTCCAACCATTGCAATGATGATATCCATTGTTGCATTTGTGGTTGGCTTCCCTCTCTATAAGCATGTCAAGCCAGAGGGCAGTCCTTTGATTCGTTTGGCACAAGTGGTTGTGGCTGCTATCAAGAAGAGGAAACAACCTTTGCCTTCTGATGCTAAGCTTTTGTACCAAAATAAGGAGCTTGATGCTGGCATTTCCACAGAAGGAACTCTTCTACACTCTGACCAATTCAAATGGTTGGACAAGGCTGCAATTGTAACAGAGGATGATAGCAGAGACCCAAACGCAGAACCAAAGTTATGGAAACTAGCCACTGTCCACAGAGTAGAAGAGCTGAAATCAATCATCAGAATGCTTCCAATTTGGGCATCAGGAATTTTACAAGTAACAGCCTCATCACACCTCCACAGCTTCGTCATCCAACAAGCTCGATCAATGGACCGCCACCTCTCTCCCTCCTTCCAAATCTCCCCTGCCAGCATGTCCATATTCAGTGTCCTAACCATGATGGTCGGCGTCATACTCTACGAGCGCCTCTTCGTTCCCTTCGCCCGCAGGTTCACCAAGAACCCTGCAGGCATCACATGCCTGCAGAGAATGGGAGTAGGCTTCGTGATCAACATTGTAGCAACTATTATCGCCGCCTTCGTCGAAATCAAGAGGAAGTCTGCCGCAGCAAAGCACCATTTATTGGACGATCCCAAAGCCACGATTCCAATCAGTGTTTTCTGGTTGGTGCCGCAGTATGTAATTCATGGAGTAGCTGAAATTTTTTCGTCTGTTGGACATTTGGAATTCTTGTATGATCAATCGCCTGAAAGTATGAGAAGTAGTGCTACTGCTTTGTATAGCATAACTTCGGCCATTGGGAATTACATTGGAACGTTGTTGGTATCACTGGTTCATGCGTACACTGGTAAAGAGAGAAATTGGTTACCTGATAGGAATCTCAATAGGGGTAGATTGGAGAATTACTACTTTCTTGTTTGTGGGATTCAAGTTGTTAATCTCATTTACTATTCCATTTGTGCTTGGTTTTATACGTACAAGCCTGTGGAGCAGGAAAGTACTAGTGAAATGCACAAGGAGTATCATGATTTGGAACGTGCCAAAGAAAATGTGTCATCTGTTGTTGTAACAGATGGTAGAGAAGAAAATGGAGATTTATATGATGAGGTGCTGGAACAACAAAAGCGTAAGCAACATAATGAAAGGAAGCATAATCAACACGGAGGAATGAAAACAGCACCCTTCATTCTTGCAAATGAAGTGTGTGACAAATTTGCATCAATTGGTTTCAATGCAAACCTGATGAGTTATCTGACACAAGAGCTGCATATGGCAACGGTTGCAGCCTCCAACACTCTGATTAACTTTGACGGAGCAGCTAACCTCGCTCCTCTTCTTGGAGCTGTCATTGCTGAGACTTTTGCCGGCACTTTTTGGACCATCATTCTTGGTTCTATTCTCTGTGAACTGGGTTTGATCATTATTACAATTTCAGCATCAATGCAGTCCCCAGGATGCCAAACCAAGTTGAATTGCGATGAAGCAACATCCTCACAACTACGGCCACTCTATCTGTCTCTCCTGCTCATAGCTTTTGGGTCAGGCTGCATTAGGCCTTGTGTTGTGCCATTTCTAGGAGACCAATTTGACATGACAAAAAAAGGTGTGGCATCTAGAAAATGGAATCTCTTCAATTTGTACACATTTAGCATGGGTTTGGCTCCACTCACTGCTTTGACCGTTGTGGTTTATGTTCAAGAAAACATGGGTTGGAGTTGGGGGCTTGGGATCCCAACCATTGCAAGGTTGATTGCTATTTTTGCTTTTGTTATGGGCTCATCATTCTACAGAAAAGTTAAACCACAAGGGTGTAGTTTGATTAGGTTGGTGCAAGTTCTTGTTGCTGCTATAAGGAAGAGGAAAGAGGCTCTTCCAGATGATCCTAAACTTTTGTATCAAAATAAAGAGCTTGATGCACCTATTTCTTTGCAAGGAAGGCTTTTGCACACATACCAATTCAGATGGTTAGACAAGGCAGCTACAGTGACAAAAGAAGAGTCCAATATCAAAGACAAAAAAGAAGCACCAAAACTATGGAGCCTAGCCACTGTACACAGAGTAGAAGAGCTAAAATCTATCCTCAGATTGGTTCCGATTTGTTTATCAACCATATTGCACGTAGCATCTGTGTCGTCCAACCAAAACTTCCTAATTCAACAAGCGCGGTCCATGGATCGCCGCATAACTTCTTCGTTCCAAATCCCACCGGCCACCATGTTTGTTTTCAGTGTGATGACAATGATGATTGGTGTCATTTTATATGAACACCATTTTGTTCCCTTTGCAAGTAGACTAACCAAGAATCCTTCTGGCCTCACATGCCTACAAAGAATGGGAATAGGGTATGGAATCAGCATAGTAGCCACAATAGTTTCATCACTCATTGAAATCAAAAGAAAAAATGTTGCTACAAAGTACAATATGTTGGACAGCCCTAAAGCCATTGTTCCAATTAGTGTGTTTTGGTTGTTACCCCAAATTTGTTTGCATGGTTTGGTTAAAGTGTTTATGTCTGGTGGGCATTTGGAGTTTCTCTATGACCAATCACCTGAGAGCATGAGAAGCACCACCATAGCTCTGTTTTCCATATTCATATCTATTGGAAACTATTGTAGCACTATGATGGTATCTTTTGTTCATAGGTTTAGTGGAAATGATGAGAGTAATTGGTTGCCTAATAGGAACTTGAATAAGGGTAGATTAGAGTATTATTACTTGCTTGTTAGTGTGGTGCAAGTTATTAATCTCATTTATTATGTCATTGTTGCTTGCTTTTACACTTACAAACCTGTGGAAGAGATTAGTAGTGTCATGATGAATGGGAAAGAGGATTTACAACAGGGAAAAGAAAAAATCTTTGTACTTGAAAGTGGTTGTACTATGGAGGATCAAAAGATGATTCTTACCGTTGAAAGGTGA	3657	0.4228	MEIEKNVTKGNGESVAEEERNKNMKRKQCRQGGIRTLPFILANEVCDRFAVAGFSGNLISYLTQVMNMPLVAASNTLTNFAGTSSFTPLLGAIIAESFAGRFWTITIASLIYELGMISMTLSAILPHFRPPPCPKQVNCQEATSSQLWILYMSLLLTSLGSGGIRPCVVPFSGDQFDMSKKGVESRKWNLFNWYFFSMGFASLSALTVVVYIQDNMGWGWGLGIPTIAMMISIVAFVVGFPLYKHVKPEGSPLIRLAQVVVAAIKKRKQPLPSDAKLLYQNKELDAGISTEGTLLHSDQFKWLDKAAIVTEDDSRDPNAEPKLWKLATVHRVEELKSIIRMLPIWASGILQVTASSHLHSFVIQQARSMDRHLSPSFQISPASMSIFSVLTMMVGVILYERLFVPFARRFTKNPAGITCLQRMGVGFVINIVATIIAAFVEIKRKSAAAKHHLLDDPKATIPISVFWLVPQYVIHGVAEIFSSVGHLEFLYDQSPESMRSSATALYSITSAIGNYIGTLLVSLVHAYTGKERNWLPDRNLNRGRLENYYFLVCGIQVVNLIYYSICAWFYTYKPVEQESTSEMHKEYHDLERAKENVSSVVVTDGREENGDLYDEVLEQQKRKQHNERKHNQHGGMKTAPFILANEVCDKFASIGFNANLMSYLTQELHMATVAASNTLINFDGAANLAPLLGAVIAETFAGTFWTIILGSILCELGLIIITISASMQSPGCQTKLNCDEATSSQLRPLYLSLLLIAFGSGCIRPCVVPFLGDQFDMTKKGVASRKWNLFNLYTFSMGLAPLTALTVVVYVQENMGWSWGLGIPTIARLIAIFAFVMGSSFYRKVKPQGCSLIRLVQVLVAAIRKRKEALPDDPKLLYQNKELDAPISLQGRLLHTYQFRWLDKAATVTKEESNIKDKKEAPKLWSLATVHRVEELKSILRLVPICLSTILHVASVSSNQNFLIQQARSMDRRITSSFQIPPATMFVFSVMTMMIGVILYEHHFVPFASRLTKNPSGLTCLQRMGIGYGISIVATIVSSLIEIKRKNVATKYNMLDSPKAIVPISVFWLLPQICLHGLVKVFMSGGHLEFLYDQSPESMRSTTIALFSIFISIGNYCSTMMVSFVHRFSGNDESNWLPNRNLNKGRLEYYYLLVSVVQVINLIYYVIVACFYTYKPVEEISSVMMNGKEDLQQGKEKIFVLESGCTMEDQKMILTVER	1218

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip06g02132	1218	PANTHER	OLIGOPEPTIDE TRANSPORTER-RELATED	22	584	IPR000109	GO:0016020\|GO:0022857\|GO:0055085
	Aip06g02132	1218	PANTHER	OLIGOPEPTIDE TRANSPORTER-RELATED	621	1186	IPR000109	GO:0016020\|GO:0022857\|GO:0055085
	Aip06g02132	1218	PANTHER	NITRATE TRANSPORTER 1	22	584	-	-
	Aip06g02132	1218	PANTHER	NITRATE TRANSPORTER 1	621	1186	-	-
	Aip06g02132	1218	MobiDBLite	consensus disorder prediction	1	26	-	-
	Aip06g02132	1218	Gene3D	MFS general substrate transporter like domains	8	579	IPR036259	-
	Aip06g02132	1218	Gene3D	MFS general substrate transporter like domains	609	1180	IPR036259	-
	Aip06g02132	1218	SUPERFAMILY	MFS general substrate transporter	19	567	IPR036259	-
	Aip06g02132	1218	SUPERFAMILY	MFS general substrate transporter	653	1168	IPR036259	-
	Aip06g02132	1218	Pfam	POT family	704	1131	IPR000109	GO:0016020\|GO:0022857\|GO:0055085
	Aip06g02132	1218	Pfam	POT family	102	534	IPR000109	GO:0016020\|GO:0022857\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip06g02132	Aip-Chr6	94683695	94767566	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip06g02132	42	582	Organic Solute Cotransporters	AT1G68570	59.116	0.0	656

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip06g02132	-		-	vun:114190486	1534.24