Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02127 ATGCAAAGAAGAGAGAAGAAAATGGAGATAGAGAAGAGCAACGACAACAATGAATTTTTCAGAGATGAACAGCAAGAGAGTGGCTGCAACAGAAAACAAAAGCGAAAAGGAGGCCTCCGAACATTGCCTTTTATCTTCTCAAACGAATTTTGCGATAGATTTGCGGTGGCGGGATTTAATGGTAACTTGATAAGTTACCTGACACAAGTGATGAACATGCCATTGGTATCTGCATCCAACATACTAACAATAATTGGTGGAACATCGAGCTTCACTCCTCTCCTTGGTGCTCTCATTGCTGAGTCCTTTGCTGGTCAGTATAGGACTATCACTGCCGCTTCCCTCATCTATCAACTGAAATGGAACATCTTCAATTGGTACTTCTTTGGCTTGGGTTTGGCGTCTCTAACTGCTTTAACCATTGTGGTTTACATCCAAGACAACACTGGGTGGGGTTGGGGATTTGGCATACCAACAATTGTTATGCTATTTTCTATTCTTGCATTTGTGCTGGGGTCACCACTCTATAGGAATGTGAAACCAAAGGGAAGCCCTTTGGTTCGTTTGGTGCAAGTGATTGTGGCAGCTATAAGGAAGAGGAAAGAGGATTTGCCTAATGATCCTAACCTTTTCTACCAAAATAAGGAGCTTGATGCTCCTATTTCATTGGAAGGAAGACTTCAACACACAGATCAATATAAATGGTTGGACAGAGCTACAATTGTGACAGAAGAAGAAGCTAGAGATCTAAATTCAGCACCAAACCTATGGAAACTAGCCACTGTCCACAGAGTTGAGGAACTAAAATCCATCATTAAAATCATTCCAATTTCTTCAACAGGGATCTTGCTCATAACAGCTTCATCTCATCTTCCAAGCTTTGTAATCCAACAAGCTCGAACAATGAACCGCCACCTCTCTCACTCATTCCAAATCTCCCCAGCAAACATGTCAGTATTCAGCGTCATAACCATGATGGCCGGAGTAGCTCTCTATGACGTCCTCTTCGTCCCCCTCGTCCGCCGCTTCACAAAAAATCCTACAGGAATCACATGCATACAGAGAATGGGAATAGGATTCATGATTAACATTGTGGCCACAGCTATCTCAGCACCGGTCGAAGTCAAAAGAAAAGAAATTGCTTCACAACATAACTTGTTGGATGATCCAACTGCTATTATTCCAATAAGTGTGTTTTGGTTGGTACCTCAGTATTGTTTGCATGGTTTGGCTGATGTTTTTATGTCTGTTGGACTCTTTGAATTTCTCTATGATCAATCACCTGAGAGCATGAGAAGTAGTGCTACTGCTATATATTGCATAGTTATAGCAATTGGGAGCTATGTTGGTACATTTTTGGTGACATTAGTTCATAAGTATAGTGGCAAAAATGAGAAGAATTGGTTGCCTGATAGGAACCTTAATAGGGGTAGATTAGAGTATTATTACTTGCTTGAAGAACAGTTAAGGTTAACAACTGACAGATTCGGCAGTAATGAAGCAGAATTTGGTTCGGGAAATGGTGGCAAGAGTGTGAGGTTGCAGAGCAATGCTTGTGAGGAATAA 1566 0.4132 MQRREKKMEIEKSNDNNEFFRDEQQESGCNRKQKRKGGLRTLPFIFSNEFCDRFAVAGFNGNLISYLTQVMNMPLVSASNILTIIGGTSSFTPLLGALIAESFAGQYRTITAASLIYQLKWNIFNWYFFGLGLASLTALTIVVYIQDNTGWGWGFGIPTIVMLFSILAFVLGSPLYRNVKPKGSPLVRLVQVIVAAIRKRKEDLPNDPNLFYQNKELDAPISLEGRLQHTDQYKWLDRATIVTEEEARDLNSAPNLWKLATVHRVEELKSIIKIIPISSTGILLITASSHLPSFVIQQARTMNRHLSHSFQISPANMSVFSVITMMAGVALYDVLFVPLVRRFTKNPTGITCIQRMGIGFMINIVATAISAPVEVKRKEIASQHNLLDDPTAIIPISVFWLVPQYCLHGLADVFMSVGLFEFLYDQSPESMRSSATAIYCIVIAIGSYVGTFLVTLVHKYSGKNEKNWLPDRNLNRGRLEYYYLLEEQLRLTTDRFGSNEAEFGSGNGGKSVRLQSNACEE 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02127 521 SUPERFAMILY MFS general substrate transporter 24 462 IPR036259 -
Aip06g02127 521 Gene3D MFS general substrate transporter like domains 120 487 IPR036259 -
Aip06g02127 521 Coils Coil 3 23 - -
Aip06g02127 521 Pfam POT family 80 467 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aip06g02127 521 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 120 486 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aip06g02127 521 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 25 119 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aip06g02127 521 Gene3D MFS general substrate transporter like domains 11 119 IPR036259 -
Aip06g02127 521 MobiDBLite consensus disorder prediction 502 521 - -
Aip06g02127 521 MobiDBLite consensus disorder prediction 1 33 - -
Aip06g02127 521 MobiDBLite consensus disorder prediction 1 34 - -
Aip06g02127 521 PANTHER NITRATE TRANSPORTER 1 120 486 - -
Aip06g02127 521 PANTHER NITRATE TRANSPORTER 1 25 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02127 Aip-Chr6 94344333 94347590 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02127 121 485 Organic Solute Cotransporters AT1G68570 57.377 2.96e-153 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02127 - K14638 gmx:100786998 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02127 06 94344333 94347590 Aip06g02127 06 94344333 94347590 ECH