Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02052 ATGCAAGCAGCGGGCGTTCACAGCTACGTTGCAGAGTGGCCAATTTCCTGTCTAGCATGGTCAGTCCGCCGTGACAAAGCCCCGCGCCTGGCCATAGGCAGCTACTTGGAAGACTACACAAACAAAGTCGAACTCATTCACTTCAACTACCACACCTTCAACTTCACCACCGATCCTCGTTTGGTGCTGGACCACCCATACGCCCCAACCAACCTCATGTTCTTCCCCTCCGACAACGATACCAACCCCGACCTCCTCGCCACTTCCGGCGACAACCTCAGACTCTGGCAAATTCACCACGACCACATTCAACTCAAGTCCCTCTTAATTGGTAACAAAGTCAGTGACCACTCCGCAATAACGTCGTTTGACTGGGCAGGGTTCGATCCTCGTCTTGTGGCCACTTCTAGCGTCGACACCACGTGCACCATTTGGGACATTGAAAGGGAATCCATGAATGCGCAGCTTGTGGCGCACGATAAAGAGGTGTATGATATTTCATGGGGTGGGCTTAACGTCTTTGCTTCTGTCTCTGGTGATGGTTCTGTTAGGGTGTTTGATCTGAGAGACAAGGAGAAATCGACCATCATTTATGAGAATCCGGTTCAAGATTGTCCCTTGTTGCGTCTCGAATGGAACAAAGCGGATCCCAGGTTTATGGCGACGGTTGGAATGAACAGCAGTAAGGTGGTGGTTATGGATATTAGGCAACCAACAACGCCTTTTATGGAGTTAAGTAAGCATAGGATGAGTGTTAATGGTGTATCGTGGTCCCCGGATATCGGACGGCATTTGTGCTCTGTTGGTGATGATTCAACGGCCTTGATTTGGGAGGTGATGGAAACGGGGGTTCAAGGTGGTTGTTGTGATGTAGAGCCCTTGATGTGGTATGGATCAACGGCTGAGATCAATCACGTGTGTTGGTCTCCTATGCAGTGGGACTGGATTGCACTTACTTTCTTAAATAATTTGCAACTACTCAAGGTGTAG 990 0.496 MQAAGVHSYVAEWPISCLAWSVRRDKAPRLAIGSYLEDYTNKVELIHFNYHTFNFTTDPRLVLDHPYAPTNLMFFPSDNDTNPDLLATSGDNLRLWQIHHDHIQLKSLLIGNKVSDHSAITSFDWAGFDPRLVATSSVDTTCTIWDIERESMNAQLVAHDKEVYDISWGGLNVFASVSGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKADPRFMATVGMNSSKVVVMDIRQPTTPFMELSKHRMSVNGVSWSPDIGRHLCSVGDDSTALIWEVMETGVQGGCCDVEPLMWYGSTAEINHVCWSPMQWDWIALTFLNNLQLLKV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02052 329 PANTHER WD REPEAT CONTAINING PROTEIN 3 329 IPR045159 -
Aip06g02052 329 ProSiteProfiles Trp-Asp (WD) repeats profile. 156 196 IPR001680 GO:0005515
Aip06g02052 329 SUPERFAMILY WD40 repeat-like 14 323 IPR036322 GO:0005515
Aip06g02052 329 Pfam WD domain, G-beta repeat 115 146 IPR001680 GO:0005515
Aip06g02052 329 ProSitePatterns Trp-Asp (WD) repeats signature. 265 279 IPR019775 -
Aip06g02052 329 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 245 279 - -
Aip06g02052 329 ProSiteProfiles Trp-Asp (WD) repeats profile. 245 279 IPR001680 GO:0005515
Aip06g02052 329 Gene3D - 5 324 IPR015943 GO:0005515
Aip06g02052 329 PANTHER WD REPEAT-CONTAINING PROTEIN LWD1-LIKE 3 329 - -
Aip06g02052 329 SMART WD40_4 107 146 IPR001680 GO:0005515
Aip06g02052 329 SMART WD40_4 238 278 IPR001680 GO:0005515
Aip06g02052 329 SMART WD40_4 56 97 IPR001680 GO:0005515
Aip06g02052 329 SMART WD40_4 149 187 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02052 Aip-Chr6 89416151 89417140 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02052 K11805 - zju:107416321 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02052 06 89416151 89417140 Aip06g02052 06 89416151 89417140 ECH