Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02044 ATGAGTCAATTAAGGTGCATCCACTCTTTAATAGCGGTGTTATTTTTTACTGTAATACTCATAATTAGCAATAATGGTGTTGATGCTTTTCACAAAGTACACCCACATCTTCAATCTGTTTCAAGGATTTCTGTGAGCGGCAAACACAGAACTGGATACCATTTTCAACCTCCTAGGAATTGGATTAACGGTTTGTGTAACCGACCTATGCACTACAATGGATACTACCATCTGTTTTATCAATACAACCCTAAAGGTTCAGTGTGGGGTAATATTGTATGGGCTCACTCAGTCTCAAAAGATCTCATCAATTGGAAAGCACTTGAGCCGGCCATTTATCCATCGAAACCCTTCGACAAGTTCGGGTGTTGGTCAGGCTCAGCCACCATCATCCCCGGAAAAGGGCCGGTGATCCTCTACACCGGAATAGTCGACGCGAACAAGACTCAAGTTCAATGCTATGCCGTCCCAGAAGACTTATCCGACCCCTTCCTCACAAAATGGATCAAACCGGACGAGTATAATCCCATCGTGGTCGCCGGCCCCGGCGTTAATAGCACCGACTTCCGGGACCCAACAACTGCATGGTTCAAAGACGGACACTGGAAGATTTTGGTTGGTAGTAGAAGAAAGCATAGAGGAATTGCATACTTGTATAGGAGTAGGGACTTCAAGAAATGGATTCGAGCCAAACACCCTATTCATACTGCTGCTGGAACGGGTATGTGGGAGTGTCCAGATTTCTACCCGGTTTCTATGGAGGGGACAATGGGATTGGATACGTCTGTGGTTGGTAATCATGTTAAGCATGTGTTGAAGAATAGTCTTGATGAGACTAGGTTTGAGTATTATACTTTAGGTACCTATTTCACCAATATAGATAGGTATATACCGGACAACACCTCTGTTGATGGTTGGGCTGGTCTTAGGTATGATTATGGTAATTTCTATGCATCCAAGTCCTTCTTTGACCCCACTATGAATAGAAGGATCTTGTGGGGTTGGGCTAATGAGTCTGATACTAAGGAAGATGATATTCACAAAGGATGGGCAGGAATTCAGGCAATTCCAAGAACTTTGTGGCTTGATCCTAGCGGTAGACAATTGGTACAATGGCCTATTGAGGAATTAAATAGCCTTAGGGACAAAGAAGTAGAGATTAGCAATCTAAAGCTTGCAAAGGGAGATTATGTTGAAGTTAAAGGAATTACTGCTGCTCAGGCAGATGTAGAAGTTACCTTCTCATTTTCAAGCTTGAACGAGGCTGAAGCATTTGATCCAAGTTGGGTCAACGCAGAGGATTTGTGTGGCAAAAAGGGTTCAAATATTCAAGGTGGAGTTGGCCCTTTTGGTATTCTAACATTGGCTTCAAATAATTTGGAGGAATATACTCCTGTCTTCTTTAGAATTTTTAAAGCTTCGAACAAGCATGTAGTGCTCTTATGCTCCGATGCAAGAAGTTCTTCTTTGAAGAGTGAGTTGTACAAGCCATCATTTGCTGGATTTGTAGATGTGGATTTGTCTACTACTAAGAAGCTTTCTCTTAGGAGTTTGATCGATCATTCTGTAGTGGAGAGTTTTGGAGCAGGCGGAAAAACAAATATTTTATCTAGGGTTTATCCTGAGTTAGCTGTGGCAGATCAAGCTCACTTATTTGTGTTTAACAATGGAACTGTACCAATCGTTATGGAAAATCTTAGATCATGGTGCATGAAATCTGCTGTTATAAATTGA 1734 0.4193 MSQLRCIHSLIAVLFFTVILIISNNGVDAFHKVHPHLQSVSRISVSGKHRTGYHFQPPRNWINGLCNRPMHYNGYYHLFYQYNPKGSVWGNIVWAHSVSKDLINWKALEPAIYPSKPFDKFGCWSGSATIIPGKGPVILYTGIVDANKTQVQCYAVPEDLSDPFLTKWIKPDEYNPIVVAGPGVNSTDFRDPTTAWFKDGHWKILVGSRRKHRGIAYLYRSRDFKKWIRAKHPIHTAAGTGMWECPDFYPVSMEGTMGLDTSVVGNHVKHVLKNSLDETRFEYYTLGTYFTNIDRYIPDNTSVDGWAGLRYDYGNFYASKSFFDPTMNRRILWGWANESDTKEDDIHKGWAGIQAIPRTLWLDPSGRQLVQWPIEELNSLRDKEVEISNLKLAKGDYVEVKGITAAQADVEVTFSFSSLNEAEAFDPSWVNAEDLCGKKGSNIQGGVGPFGILTLASNNLEEYTPVFFRIFKASNKHVVLLCSDARSSSLKSELYKPSFAGFVDVDLSTTKKLSLRSLIDHSVVESFGAGGKTNILSRVYPELAVADQAHLFVFNNGTVPIVMENLRSWCMKSAVIN 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02044 577 Gene3D Glycosyl hydrolase domain; family 43 59 385 IPR023296 -
Aip06g02044 577 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 10 576 - -
Aip06g02044 577 SUPERFAMILY Arabinanase/levansucrase/invertase 45 374 IPR023296 -
Aip06g02044 577 CDD GH32_Fruct1-like 60 362 - -
Aip06g02044 577 SUPERFAMILY Concanavalin A-like lectins/glucanases 373 574 IPR013320 -
Aip06g02044 577 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 10 576 - -
Aip06g02044 577 Pfam Glycosyl hydrolases family 32 N-terminal domain 54 373 IPR013148 -
Aip06g02044 577 Gene3D - 386 571 - -
Aip06g02044 577 Pfam Glycosyl hydrolases family 32 C terminal 376 568 IPR013189 -
Aip06g02044 577 SMART glyco_32 54 531 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02044 Aip-Chr6 88591790 88595473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02044 26 571 Glycoside Hydrolase AT2G36190 63.506 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02044 K01193 - gmx:100799008 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02044 06 88591790 88595473 Aip06g02044 06 88591790 88595473 ECH