Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02043 ATGTCTCTTCGCCACGAGAAAGAGAAGGGAGTGAATGTGCAGGTCCTCCTCCGCTGCCGCCCCTTCAGCGACGACGAGTTGCGCTCCAACGCCCCCCAGGTTGTCACCTGCAATGACTATAACAGAGAAGTCGCCGTCTCTCAGAACATCGCCGGCAAGCACATTGACAGGGTTTTCACTTTTGACAAGGTTTTTGGTCCTAATGCACGACAACAAGATCTTTACGATCAAGCTATTATTCCTATTGTAAATGAAGTTCTAGAAGGATTTAATTGTACTATATTTGCATATGGTCAAACTGGTACTGGAAAAACATACACTATGGAAGGTGAATGCAAAAGGTCAAAGAGTGGTCCCAATGGAGAGTTGCCTGCAGAGGCTGGAGTCATTCCTAGAGCTGTTAAACAGATTTTTGACACTCTTGAGAGCCAAAATGCTGAGTACAGTGTCAAAGTCACTTTTTTGGAATTGTACAATGAAGAGATCACCGATTTGCTCGCCCCCGAAGAACTTTCGAAAGTTTCTTTGGAAGATAAGCAAAAGAAGCAGCTGCCACTTATGGAGGATGGCAAAGGTGGAGTTCTTGTAAGGGGATTAGAGGAAGAAATTGTGACGAGTGCTAGCGAGATTTTTACCCTTCTGGAGAGAGGGTCTGCCAAAAGACGCACTGCAGAAACTCTGTTGAACAAGCAGTCAAGTCGGTCACATTCATTGTTTTCAATAACAATCCACATCAAAGAGGCAACCCCAGAAGGTGAAGAACTAATCAAATGTGGCAAACTGAATTTAGTGGATCTGGCTGGCTCGGAAAATATATCTCGTTCTGGTGCTAGGGAGGGTCGTGCAAGAGAGGCCGGAGAAATAAACAAGAGCTTGCTTACTTTAGGGCGGGTGATCAATGCACTTGTGGAGCACCTTGGTCACGTTCCTTACAGGGATAGCAAGTTGACACGTTTACTGCGTGATTCCCTTGGGGGAAGAACCAAAACATGCATCATAGCGACAGTATCCCCTGCAGTTCATTGCTTGGAAGAAACTTTGAGCACGCTCGATTATGCACATAGGGCAAAGCACATTAAAAATAAGCCTGAGGTTAATCAGAAGATGATGAAGTCAACTCTTATTAAGGATCTTTATGGGGAAATTGAACGCCTGAAGGCAGAGGTTTATGCTACACGTGAGAAAAATGGAGTGTATATACCAAAGGAGAGATTTTATCAAGAAGAAAGTGAAAGAAAGGCCATGGCAGATCAGATTGAGCAGATGGGGCAGACTATAGAAAATCATCAGAAGCAATATGATGATTTGAATAGTAGATACATTGAGCAAGTTCGACATTGCTCTGATTTGAGCAACAAACTTGATACCACACAGAAAAACTTGAACAAGACCAGTGAGTTGCTCACTAACACAGAGGATGAATTGAGGAGATGTAAGTATACCGTGAAAGAGAAAGACTTCATCATTTCTGAGCAGAGAAAAGCAGAAAATGCTCTAGCTCATCAAGCTTGTGTATTACGGGCTGATTTGGAGAAAGTTCTTCAGGATAATGCTTCACTGTTTTTGAAAATTGGTAGGCATTTATCCTTTTCTGTGCAATTATTGACAAAGAATCCAAGTTGTACCGTTAATGACTTGTATACATCTGTTATCGTAGGTAGAGAAGACAAGCTGAACCTGGATAACAGGGCTGTGGTGAACAATTTTCAAGCAGAGCTTGCCCAGCAGGTTGGTTATCTTTGCAATATTGTTGCGACATCATTGTCAGAACAGAGTGAACATCTGACATGTGTGGAGACGCTCTGCCATTCTTTTCTAGGTGTTCATGATAAGGTGGTTTTGGATTTAAAAAACAAAGTGACAGGTTTAAGAAACCTGTACTTATCACACATTGAGGCAGTGCAAAATGTGGTCCGTTTGCATAAGGCGAGCTCAGATGGTGTTTTAGAGGAATTATCTTCTCTGATATCCTCCAATGGTCGTTCTATTCAAGAATTTCTTGAATCTGAGGCCACTCAAGCTGGAGCAATATTTGATGAACTTCAGAGCTCTCTTTCAACTCAGCAGGGTGAACTGGCAGTTTTTGCTAGGGAAATGCGCCATTTTCTTTTGCTGTATTTTGTTTATTCAGAGGCTGAGCAAACACAACTGAATTGTATTGCTGACTTTAGGAAGTCTTTCGAGGAGCAATCAAGATCTGATTCAGAGAAGCTTATTGCGGATATGACCAGCTTAGTTTCTGATCATATTCGTCGTCAAATGGATCTGGTGGATGAAAAGCTTGTTGATCTTAGACAGAGCAGCATTAAGAGCAAGACTTTCTTGGACGAACATGTGTCATCAGTAGGAGAAATTGTGTCCCATGCAAAAAGGAAATGGCAATCTTTTTGTGTGCAAGCAGAGAAAGAGACCAAGGATACTGCTGATTATTCTGCAGCAAAGCATTGCCGTATGGAGTTACTCATGCAGCAAAGTGTAAGTACCGCTGGATCAGCTTTAGAGCATATGAAGAGGACTCATGAGGCTGTAAATGAGAAAGAGTCCAAGCATATTTCTGCAGCAGTGTCACTAATCAGTAATTCTTCTAATAGCAATGAGCAACATGACATGGGATCAATTCTGCTCGTGTTGCAGCAGAGGAAGATGTGGCAAAGAACAGCAAGGATCTCTTTGAGCAGTTTGATGTCATGTCTGCGCAAGAGCGGGAATCCATTTCTGGAATGCTGGATGTAG 2733 0.4255 MSLRHEKEKGVNVQVLLRCRPFSDDELRSNAPQVVTCNDYNREVAVSQNIAGKHIDRVFTFDKVFGPNARQQDLYDQAIIPIVNEVLEGFNCTIFAYGQTGTGKTYTMEGECKRSKSGPNGELPAEAGVIPRAVKQIFDTLESQNAEYSVKVTFLELYNEEITDLLAPEELSKVSLEDKQKKQLPLMEDGKGGVLVRGLEEEIVTSASEIFTLLERGSAKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHVPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKHIKNKPEVNQKMMKSTLIKDLYGEIERLKAEVYATREKNGVYIPKERFYQEESERKAMADQIEQMGQTIENHQKQYDDLNSRYIEQVRHCSDLSNKLDTTQKNLNKTSELLTNTEDELRRCKYTVKEKDFIISEQRKAENALAHQACVLRADLEKVLQDNASLFLKIGRHLSFSVQLLTKNPSCTVNDLYTSVIVGREDKLNLDNRAVVNNFQAELAQQVGYLCNIVATSLSEQSEHLTCVETLCHSFLGVHDKVVLDLKNKVTGLRNLYLSHIEAVQNVVRLHKASSDGVLEELSSLISSNGRSIQEFLESEATQAGAIFDELQSSLSTQQGELAVFAREMRHFLLLYFVYSEAEQTQLNCIADFRKSFEEQSRSDSEKLIADMTSLVSDHIRRQMDLVDEKLVDLRQSSIKSKTFLDEHVSSVGEIVSHAKRKWQSFCVQAEKETKDTADYSAAKHCRMELLMQQSVSTAGSALEHMKRTHEAVNEKESKHISAAVSLISNSSNSNEQHDMGSILLVLQQRKMWQRTARISLSSLMSCLRKSGNPFLECWM 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02043 910 Coils Coil 375 395 - -
Aip06g02043 910 PRINTS Kinesin heavy chain signature 309 330 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip06g02043 910 PRINTS Kinesin heavy chain signature 89 110 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip06g02043 910 PRINTS Kinesin heavy chain signature 226 243 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip06g02043 910 PRINTS Kinesin heavy chain signature 260 278 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip06g02043 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 399 IPR027417 -
Aip06g02043 910 PANTHER KINESIN-LIKE PROTEIN KIF11 552 702 - -
Aip06g02043 910 PANTHER KINESIN-LIKE PROTEIN KIF11 713 870 - -
Aip06g02043 910 PANTHER KINESIN-LIKE PROTEIN KIF11 1 527 - -
Aip06g02043 910 PANTHER KINESIN MOTOR DOMAIN-CONTAINING PROTEIN-RELATED 713 870 - -
Aip06g02043 910 ProSitePatterns Kinesin motor domain signature. 259 270 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aip06g02043 910 SMART kinesin_4 10 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip06g02043 910 PANTHER KINESIN MOTOR DOMAIN-CONTAINING PROTEIN-RELATED 552 702 - -
Aip06g02043 910 Coils Coil 412 439 - -
Aip06g02043 910 Gene3D Kinesin motor domain 2 390 IPR036961 -
Aip06g02043 910 ProSiteProfiles Kinesin motor domain profile. 12 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip06g02043 910 PANTHER KINESIN MOTOR DOMAIN-CONTAINING PROTEIN-RELATED 1 527 - -
Aip06g02043 910 CDD KISc_BimC_Eg5 10 368 - -
Aip06g02043 910 Coils Coil 447 474 - -
Aip06g02043 910 Pfam Kinesin motor domain 18 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02043 Aip-Chr6 88584219 88590278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02043 12 447 Miscellaneous Gene Families AT5G06670 34.624 1.62e-65 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02043 K10398 - gmx:100800246 1347.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02043 06 88584219 88590278 Aip06g02043 06 88584219 88590278 ECH