Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02028 ATGGTTCCCCTTTGCAACCCTACGGTTTCTCTGCCCCTCCCGATTCCGACGAAAGCCAAGAACCGCTCCTCGAATTCAATTATAACCAACTCTGCTTCTTCCAGCAAGAGGCAGCGAACAACTACAACTACTTCCTTTTCGCCCTTCGAAACACGAGTCTCACTCATTTTCGCCCTTGCTTCTCAAGCTACCTCTCTCTCCCAGCGACTTATAGCTGACGTGGCTTCTGAGACTGCAAAGTACGTGTTTCCTAAAAGATTTGAAAGCCGCACGCTCGAGGAGGCCTTCATGGCAGTTCCCGACCTTGAGACTCTCAACTTCAAAGTTCTTAGTAGAACGGACTTCTATGAGATCCGGGAAGTTGAGCATTATTTTGTGGCAGAGACTACAATGCCTGGGAAGACTGGCTTTGATTTCAATGGTTCTTCTCAATCCTTTAATGTCCTAGCTGAGTACCTCTTCGGTAAGAATACAAGAAAGGAAAAAATGGAGATGACTACACCAGTGATTACAACTAAGAATCCGTCGGATGGGGTTAAAATGGAGATGACTACCCCTGTGCTAACAACAAAGTCAGAAGATCCAGATAAATGGAAAATGTCTTTTGTCATGCCATCAAAATATGGTGCTGATCTGCCACTGCCTAGAGACTCCTCTGTGATGATTAAAGAGATCCCCAGAAAAATAGTTGCTGTAGTTTCATTTTCAGGTTTTGTGAATGATGAAGAAGTCAAGCATCGTGAACTGAAATTACGCGAAGCCTTGAAAAGTGACAGACAGTTCAAAATTAAAGAGGGAAGTTCAGTAGAAGTTGGACAATACAATCCACCATTTACCCTACCATTTCAACGGCGCAATGAAGTGGCATTGGAGGTGGAACGGAAAGATGAGTAG 894 0.443 MVPLCNPTVSLPLPIPTKAKNRSSNSIITNSASSSKRQRTTTTTSFSPFETRVSLIFALASQATSLSQRLIADVASETAKYVFPKRFESRTLEEAFMAVPDLETLNFKVLSRTDFYEIREVEHYFVAETTMPGKTGFDFNGSSQSFNVLAEYLFGKNTRKEKMEMTTPVITTKNPSDGVKMEMTTPVLTTKSEDPDKWKMSFVMPSKYGADLPLPRDSSVMIKEIPRKIVAVVSFSGFVNDEEVKHRELKLREALKSDRQFKIKEGSSVEVGQYNPPFTLPFQRRNEVALEVERKDE 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02028 297 PANTHER OS02G0533200 PROTEIN 15 297 - -
Aip06g02028 297 MobiDBLite consensus disorder prediction 22 44 - -
Aip06g02028 297 PANTHER HEME-BINDING PROTEIN-RELATED 15 297 IPR006917 -
Aip06g02028 297 Gene3D Regulatory factor, effector binding domain 101 176 IPR011256 -
Aip06g02028 297 Gene3D Regulatory factor, effector binding domain 177 297 IPR011256 -
Aip06g02028 297 Pfam SOUL heme-binding protein 102 290 IPR006917 -
Aip06g02028 297 SUPERFAMILY Probable bacterial effector-binding domain 174 292 IPR011256 -
Aip06g02028 297 SUPERFAMILY Probable bacterial effector-binding domain 96 177 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02028 Aip-Chr6 87391393 87399702 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02028 - - ccaj:109796809 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02028 06 87391393 87399702 Aip06g02028 06 87391393 87399702 ECH