Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02008 atggtggggaggagGCATCATCATCATCATCATCATATATATAATTTGTTTTTGCGCTGTTTACTCATCAATAATTTCAGTAAGATGGGGATGGTGATGCAAATGCGTCTCTTGCAGATGGTGGTGTTATTCATCGGAGTATTTGAATTAAACGGCGTCGTTTGTTCTTACACTAGGCCTCCTGTTCGTAAAACCATCTTTGTTCCTCATGACGATGATGATTCCAACTCACCAGAACAGGTACATATATCTCAAGTGGGCCAAGATAAGATGAGAATATCATGGATCACAAGCAACTCAGGCCCAGCAAAAGTTGAATTCGGCCCATCTCCTTCTTCTACAAGCGCATTCTCTGAAACTGGTTCTACCTCGTCATATCATTATACCTTGTATGAATCTGGAGAAATTCATGACGTGGTAATTGGGCCACTGAAGCCCAACAGTGTCTACTACTACCGTTTGGGTGATCCACCTTCTAGCCGAACCTACCAGCTCAAGACTCCACCCTCTCAATTTCCCATCAAGTTTGCAGTTGCTGGTGATCTTGGACAAACAGAATGGACAAAGTCAACGTTAGAGCATATAGAAAAGTCAAATTACGATATGCTACTACTAGCAGGTGACCTAGCCTACGCAGATATGGTACAAGAGCTATGGGACTCGTACGGTCGGCTGGTTGAGCCCTTAGCGAGCCAGCGTCCATGGATGGTGACGCAAGGGAACCATGAGATTGAGAAGATTCCCATCATCCATAGCGAGCCCTTCACAGCCTTCAATGCCAGGTGGCGAATGCCCTACGAGGAGAGCGCTTCTGACTCCAACCTCTACTACTCCTTCGACGTGGCCGGTGGTGTCCACGTCATCATGTTGGGTTCCTATACTGATTTTGAGGCTGGCTCTTCGCAGTACCAATGGCTTCAGGGGGACTTGAAGAAGGTCGATAGGTCCAAGACTCCTTGGGTGGTGGTGTTGATCCACGCGCCGTGGTATAACTCCAACCAAGCTCATCAGGGTGAGAAGGAATCCGTCAACATGAAAGCGGCTCTCGAAGGTTTGCTCTACCAAGCTCGTGTTGATCTTGTTTTTGCTGGACATGTTCATGCTTATGAGCGCTTTACGAGAGTTTATAAAGACAAAGCTGACAACTGTGGTCCAGTGCATATAACAATTGGTGATGGTGGAAACCGTGAAGGCCTTGCTACCAACTACATAGATCCGAAGCCAGACATATCGATATTCAGGGAGGCTAGCTTTGGGCATGGAATATTGGAGGTATTTAATGCATCACATGCACTTTGGAGTTGGCATAGGAATGATAATGACGAAGCTACTGCTAGTGACTCTGCTTGGTTAACAACCCTCTCGTCTAATCCTGCTTGTAAATTATCCTAG 1392 0.4569 MVGRRHHHHHHHIYNLFLRCLLINNFSKMGMVMQMRLLQMVVLFIGVFELNGVVCSYTRPPVRKTIFVPHDDDDSNSPEQVHISQVGQDKMRISWITSNSGPAKVEFGPSPSSTSAFSETGSTSSYHYTLYESGEIHDVVIGPLKPNSVYYYRLGDPPSSRTYQLKTPPSQFPIKFAVAGDLGQTEWTKSTLEHIEKSNYDMLLLAGDLAYADMVQELWDSYGRLVEPLASQRPWMVTQGNHEIEKIPIIHSEPFTAFNARWRMPYEESASDSNLYYSFDVAGGVHVIMLGSYTDFEAGSSQYQWLQGDLKKVDRSKTPWVVVLIHAPWYNSNQAHQGEKESVNMKAALEGLLYQARVDLVFAGHVHAYERFTRVYKDKADNCGPVHITIGDGGNREGLATNYIDPKPDISIFREASFGHGILEVFNASHALWSWHRNDNDEATASDSAWLTTLSSNPACKLS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02008 463 Pfam Purple acid Phosphatase, N-terminal domain 78 167 IPR015914 GO:0003993|GO:0046872
Aip06g02008 463 PANTHER ACID PHOSPHATASE RELATED 47 461 IPR039331 GO:0003993
Aip06g02008 463 SUPERFAMILY Metallo-dependent phosphatases 173 440 IPR029052 -
Aip06g02008 463 SUPERFAMILY Purple acid phosphatase, N-terminal domain 65 169 IPR008963 GO:0003993|GO:0046872
Aip06g02008 463 Gene3D - 171 460 IPR029052 -
Aip06g02008 463 CDD MPP_PAPs 170 452 IPR041792 -
Aip06g02008 463 Pfam Iron/zinc purple acid phosphatase-like protein C 384 442 IPR025733 -
Aip06g02008 463 Gene3D - 77 170 - -
Aip06g02008 463 Pfam Calcineurin-like phosphoesterase 175 369 IPR004843 GO:0016787
Aip06g02008 463 PANTHER PURPLE ACID PHOSPHATASE 47 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02008 Aip-Chr6 85784826 85790487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02008 78 420 Miscellaneous Gene Families AT1G13900 27.053 8.14e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02008 K22390 - gmx:100794764 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02008 06 85784826 85790487 Aip06g02008 06 85784826 85790487 ECH