Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01981 ATGGCATCAGCATTGATGACGGGGGATGATTTAGCCATGTCAACCAGCAGTCGCCGGAGCTGGACCTCTGCCAGCTTCAGGGACGTTTGGACTGCGGCGGCTGAGCCGGACGTTGTTGAAGAAGACAATGAGAAGTTCTTGCGCACGCTTAGAGACAGAGTCGATAGGGTGGGGATTGAAATTCCTAAAATTGAAGTCCGGTATGAGAATTTATCTGCGGAGGGAGATTTGTATGTTGGGAGTAGAGCGCTTCCTACTTTGCTTAATGCCACTCTCCACACTTTTGAGAGCATCTTAGGATTGTTTCACCTTGCACCCTCCAAGAAGAAAGAAATTCAGATTCTTAAAGATGTTAGTGGAATAATAAAGCCATCAAGAATGACTCTCCTGCTGGGTCCTCCGGGTGCTGGGAAAACTACATTGCTTCTAGCACTTGCAGGGAAACTTGACCGTGACTTAAGGTCCTCGGGGAAAATCACTTATTGTGGTCATGAGCTAAATGAATTCATTGCTGGAAAAACTTGTGCCTATATTAGTCAACATGATATTCACTATGGAGAAATGACAGTGAGAGAGACACTAGATTTCTCAGGACGCTGTTTAGGTGTTGGAACGAGGTACGAGATGCTGGTGGAACTGTCAAGAAGGGAGAAAGATGCAGGAATAAAGCCAAACCCTGAAATTGATGCATTCATGAAGGCCACAGCTATGTCAGGCCAAAAAACCAGTTTGGTAACTGATTATGTTCTCAAGATACTTGGAATGGATATTTGTGCTGACATTATGGTTGGTGATGAAATGAGAAGGGGTATCTCTGGTGGACAGAAAAAGCGCTTAACTACAGGGGAGATGTTGGTTGGACCGGCGAAGGTGCTCTTCATGGATGAAATATCAACAGGGTTGGACAGTTCCACCACATTTCAGATATGCAAGTTCTTGAGACAGATGGTTCATATCATGGATGTGACCATGGTGATTTCTCTTCTGCAGCCAGCACCAGAGACATTTGATCTCTTTGATGACATTATCCTACTTTCAGAAGGCCAAATTGTATACCAAGGTCCGCGCCAGAACGTGCTAGAGTTCTTTGAACAAATGGGATTCAAGTGTCCAGAGAGAAAAGGAGTTGCTGATTTTCTACAAGAAGTAACATCCAAGAAAGACCAGCAACAATATTGGTCTCAAAAAGATGAACCTTATAGATACGTTTCCACTTCTGAATTCGCAGAGGCCTTCAGTTCATTTAAAATAGGTGAACAACTTGTGACTGAGCTTGGGATTCCCTATGATAAGCGTGGAGTCCACCAAGCTGCTTTGGTAAAAAACAAGTATGGCATATCAAACTGGGAACTATTTAAGGCATGCTTCTCAAGAGAATGGTTGCTCATGAAGCGTAGTGCTTTTGTTTATGTATTCAAGACAACACAGATAACAATTATGTCTATCATCACCTTTACTGTGTTCCTTAGAACCCAAATGCCAGTGGGGACTGTCCAAGATGGACAAAAATTCTTTGGAGCACTATTTTTCACTCTAATAAATGTGATGTTTAATGGAATGGCAGAACTAGCCATGACTGTATTCAGGCTTCCAGTGTTCTACAAACAAAGGGATTTTTTGTTCTTCCCTGCATGGTCCTTTGGGTTACCTATATGGGTTCTAAGGATCCCTCTCTCCCTTATGGAATCAGGGATATGGATTGTTCTTACATACTATACGGTTGGGTTTGCTCCTGGTGCTGATAGATTTTTTCGACAATTCTTGGCATTGTTTGGAATCCATCAGATGGCTCTGTCTCTATTTCGATTCATTGCTGCAGTTGGTAGAACACCAGTTGTTGCTAATACACTGGGTACCTTGACCTTGCAAGTCATATTTGTGCTTGGAGGTTTTATTGTTGCCAAAGACGACATTGCACCATGGATGATATGGGGTTATTATATATCTCCTATGATGTATGGCCAGAATGCCATAGTGATGAATGAATTCTTAGATAAAAGATGGAGTCAACCAAATACAGATCCTAGAATTGATGCACCAACAGTTGGAAAATTACTTCTCAGATCTAGAGGTTTCTATACAGAAGATTATTGGTTTTGGATCTGCATTGGAGCCTTGTTTGGGTTTTCTCTTCTTTTCAATCTTCTATTCGTTGTTGCATTGACTTACTTGAATCGTGAGTTATATGTTACTCAGCACAACTCTATGCAAAAAAGTATCACCATTTCATTTAATGCTGCTAATCTTTTATCATATATAGCAGGTGCAGAGATGGAAATGAAAAATTCTTCAGAAATTTTCGGTCCTTCGAACCAAGAAGAAAGAAGAGGAATGGTTTTACCATTTGAGCCTCTATCACTTGCATTCAATCATGTTAGCTACTATGTAGATATGCCTGCTGAAATGAAGAATCAAGGTTTCAGTTCAGATAGACTACAACTACTACAAGATGTCAGTGGTGCTTTCAAACCAGGAATATTGACAGCACTTGTAGGTGTTAGTGGCGCGGGGAAGACAACGCTCATGGATGTATTAGCCGGAAGAAAAACAGGTGGTTACATCAAAGGAAATATTAGCATCTCAGGTTATCCAAAGAACCAAGCAACATTTGCTCGGATTAGCGGTTATTGTGAGCAGAATGACATTCATTCTCCACATGTTACTGTCTATGAATCACTATTATTCTCAGCATGGCTTCGTCTTCCTTCAGATGTTAAAACAGAAACACGAAAGATGTTTGTTGAAGAAGTTATGCAGTTGGTCGAGCTTATACCAATCAAAGATGCATTGGTAGGCCTTCCAGGTGTAGATGGCCTATCAACAGAACAAAGGAAGAGGCTTACTATAGCCGTAGAGCTTGTAGCCAACCCTTCAATCATCTTCATGGATGAACCAACATCTGGACTTGATGCTAGAGCTGCAGCGATTGTTATGCGAACCGTGAGAAATACAGTGGACACCGGAAGAACTGTCGTGTGTACAATTCACCAACCTAGCATAGACATTTTTGAGGCCTTTGACGAGCTATTGTTGATGAAAAGAGGAGGACAAGTTATCTATGCTGGCCCACTTGGTCGCCACTCACATAAACTCAGAGAATATTTCGAAGCTATCCCTGGAGTTCCTAAAATCAAGGATGGTTATAATCCTGCAACATGGATGCTTGATATAAGCTCCATTTCAATGGAGGCTCAATTGGATGTAGATTTTGCAGCCATCTATGCCAACTCTGACCTTTACCAGATGAATCAAGAACTCATCAAGGAGCTCAGTACTCCAACCCCAGGTTCCAAAGACTTGTCTTTCCCAGCCAAATATTCCCAATCATTCTTGGTTCAATGCAAAGCTTGCTTCTGGAAACAACATTGGTCGTACTGGAGACATCCTCAGTATAATGCTGTTAGATTCTTCATGACAATACTCATTGGACTCATTTTTGGTCTAATATTCTGGAATAAAGCAAAGAACACTCACAAACAACAAGATTTAATGAACCTTTTGGGAGCTATGTACTCTGCTGTGCTCTTCCTTGGAGCGACGAACGCTTCAGCAGTACAACCAGTTGTTGCCATTGAAAGAACCGTCTTCTATCGTGAAAGGGCTGCAGGGATGTATTCTGCATTGCCCTATGCATTTGGCCAGGTGGCAATAGAGGCCATTTACAATGCAATTCAAACTGCCATTTACACTATTATCCTTTATTCCATGATTGGTTTCGAATGGAAGGTGGGGAACTTCTTTTGGTTCTACTACTACATTCTAATGTGTTTCATATACTTCACATTGTATGGAATGATGACTGTTGCTTTGACACCTGGTCACCAAGTTGCTGCCATTTGCATGTCCTTCTTCTTGAGCTTTTGGAACTTGTTCTCTGGCTTCCTCATTCCTAGAACGCAAATCCCTGTGTGGTGGAGATGGTACTATTGGGCTTCTCCTGTTGCATGGACATTGTATGGCCTTATCACCTCTCAACTGGGTGACAAGGATGCAGAACTAGAGATACCAGGAAGTGGAACCATGCCACTGAAGCAACTCCTTAAAGATGTTTTGGGTTTTGACTATGACTTCCTTCCGGTGGTTGCTGTTGTTCATGTAGGCTGGGTGCTTCTTTTCTTGTTCGTCTTTGCCTATGGCATCAAATTCCTCAACTTTCAGAAGAGATAG 4167 0.4192 MASALMTGDDLAMSTSSRRSWTSASFRDVWTAAAEPDVVEEDNEKFLRTLRDRVDRVGIEIPKIEVRYENLSAEGDLYVGSRALPTLLNATLHTFESILGLFHLAPSKKKEIQILKDVSGIIKPSRMTLLLGPPGAGKTTLLLALAGKLDRDLRSSGKITYCGHELNEFIAGKTCAYISQHDIHYGEMTVRETLDFSGRCLGVGTRYEMLVELSRREKDAGIKPNPEIDAFMKATAMSGQKTSLVTDYVLKILGMDICADIMVGDEMRRGISGGQKKRLTTGEMLVGPAKVLFMDEISTGLDSSTTFQICKFLRQMVHIMDVTMVISLLQPAPETFDLFDDIILLSEGQIVYQGPRQNVLEFFEQMGFKCPERKGVADFLQEVTSKKDQQQYWSQKDEPYRYVSTSEFAEAFSSFKIGEQLVTELGIPYDKRGVHQAALVKNKYGISNWELFKACFSREWLLMKRSAFVYVFKTTQITIMSIITFTVFLRTQMPVGTVQDGQKFFGALFFTLINVMFNGMAELAMTVFRLPVFYKQRDFLFFPAWSFGLPIWVLRIPLSLMESGIWIVLTYYTVGFAPGADRFFRQFLALFGIHQMALSLFRFIAAVGRTPVVANTLGTLTLQVIFVLGGFIVAKDDIAPWMIWGYYISPMMYGQNAIVMNEFLDKRWSQPNTDPRIDAPTVGKLLLRSRGFYTEDYWFWICIGALFGFSLLFNLLFVVALTYLNRELYVTQHNSMQKSITISFNAANLLSYIAGAEMEMKNSSEIFGPSNQEERRGMVLPFEPLSLAFNHVSYYVDMPAEMKNQGFSSDRLQLLQDVSGAFKPGILTALVGVSGAGKTTLMDVLAGRKTGGYIKGNISISGYPKNQATFARISGYCEQNDIHSPHVTVYESLLFSAWLRLPSDVKTETRKMFVEEVMQLVELIPIKDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGRHSHKLREYFEAIPGVPKIKDGYNPATWMLDISSISMEAQLDVDFAAIYANSDLYQMNQELIKELSTPTPGSKDLSFPAKYSQSFLVQCKACFWKQHWSYWRHPQYNAVRFFMTILIGLIFGLIFWNKAKNTHKQQDLMNLLGAMYSAVLFLGATNASAVQPVVAIERTVFYRERAAGMYSALPYAFGQVAIEAIYNAIQTAIYTIILYSMIGFEWKVGNFFWFYYYILMCFIYFTLYGMMTVALTPGHQVAAICMSFFLSFWNLFSGFLIPRTQIPVWWRWYYWASPVAWTLYGLITSQLGDKDAELEIPGSGTMPLKQLLKDVLGFDYDFLPVVAVVHVGWVLLFLFVFAYGIKFLNFQKR 1388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01981 1388 Pfam ABC-transporter N-terminal 28 90 IPR029481 -
Aip06g01981 1388 Gene3D - 102 408 IPR027417 -
Aip06g01981 1388 PANTHER ATP-BINDING CASSETTE TRANSPORTER 37 1388 - -
Aip06g01981 1388 Pfam ABC-2 type transporter 996 1059 IPR043926 GO:0140359
Aip06g01981 1388 Pfam ABC-2 type transporter 330 406 IPR043926 GO:0140359
Aip06g01981 1388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 372 IPR027417 -
Aip06g01981 1388 Pfam ABC transporter 115 297 IPR003439 GO:0005524
Aip06g01981 1388 Pfam Plant PDR ABC transporter associated 668 725 IPR013581 -
Aip06g01981 1388 SMART AAA_5 824 1016 IPR003593 -
Aip06g01981 1388 SMART AAA_5 124 349 IPR003593 -
Aip06g01981 1388 Gene3D - 800 1037 IPR027417 -
Aip06g01981 1388 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 99 372 IPR003439 GO:0005524
Aip06g01981 1388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 801 1024 IPR027417 -
Aip06g01981 1388 Pfam ABC-2 type transporter 451 663 IPR013525 GO:0016020|GO:0140359
Aip06g01981 1388 Pfam ABC-2 type transporter 1113 1325 IPR013525 GO:0016020|GO:0140359
Aip06g01981 1388 Pfam ABC transporter 815 967 IPR003439 GO:0005524
Aip06g01981 1388 CDD ABCG_PDR_domain1 104 354 IPR034001 -
Aip06g01981 1388 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 37 1388 - -
Aip06g01981 1388 CDD ABCG_PDR_domain2 784 1022 IPR034003 -
Aip06g01981 1388 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 800 1039 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01981 Aip-Chr6 84131796 84139189 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01981 K08711 - gmx:100786482 2324.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01981 06 84131796 84139189 Aip06g01981 06 84131796 84139189 ECH