Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01936 ATGAGAGGGTTAGCATTATGTTACAATGAACATGCGATTAGAGTGTCCGATTCGTATTGTTCTTCAAAGCCTTCAAGCCAAGCCTATCTCTGTCCAAAGATAACCCTTTCTTCCACCAAATACTCTGTTACTTCAGTTTACAAAGTCAACTTTAATTCAACGCAAAAACCACAACTACTCTTGATATCAATAACTTGGACCAAGAAACTCATAGGCCAAGGCTTCGTCATAACCGTTACCAATAATTCTGATCCTTCTTTCCACTCCATACCAAAGGAGCACCAATTAAGAAAAAGCAAAGGAAACGAAACCTTGGAGTCTCAGAACCTTCACGTTCAAGTCTCGTGGGATGTCACTGCCGCAAAATACAGCAGCGATCAAGGGCCAGAGCCTATTGGCGGGTTCTACGTTGATGTTTCGGTGGACGCAGAACCCTGCCTGCACCTCGGTGACAACAAGAACGCCGAGGCAAATGGTGGCTATGGAAGCTTCTCGTTGGTTTCTAGAATCGAGAGGTTCTTTGGCAATACTATGTTTTCGACGAAGACGAGGTTCTCTGATGCGGGAACCTCGCACGACATAGTGATAAATTTTCGTACGGAAGACGAAGAATGTTACAAGGGACATGGACATGATGAAGTAGTATTGTGTGTGCATATGGACGAGAAGAGAATTTTGCAGGTGAAGAGGCTGAAGTGGAACTTTCGCGGGAACCAAACTGTTTTCGTGGACGGTTTAGTTGTGGATATGATGTGGGACATTCATGATTGGCTTTTCTTCGATCAAAACAACAGAGGCTCTGCTGTTTTCATGTTCCGTACGAGGAGTGGATTGGACAGTAGGTTGTGGTTGTTAGAAGAGAAGGATTTCCAGACAAGTGACAATGGATTCTCTTTGTTGATATGTGCTAACAATCAGAACATGTGCCACCAGTATCTCAGATTTTCGAGTTCTAATGATGATATTATTGATGACGACGATGATTGTGATGAGGATGAGGAGAAGTACGTATGCGGTAGCGATAGGACTGTTGGGGTTAGGATTTTGGAGTCAAAGAAGATGAGGAGGAGACTGCGATAG 1080 0.438 MRGLALCYNEHAIRVSDSYCSSKPSSQAYLCPKITLSSTKYSVTSVYKVNFNSTQKPQLLLISITWTKKLIGQGFVITVTNNSDPSFHSIPKEHQLRKSKGNETLESQNLHVQVSWDVTAAKYSSDQGPEPIGGFYVDVSVDAEPCLHLGDNKNAEANGGYGSFSLVSRIERFFGNTMFSTKTRFSDAGTSHDIVINFRTEDEECYKGHGHDEVVLCVHMDEKRILQVKRLKWNFRGNQTVFVDGLVVDMMWDIHDWLFFDQNNRGSAVFMFRTRSGLDSRLWLLEEKDFQTSDNGFSLLICANNQNMCHQYLRFSSSNDDIIDDDDDCDEDEEKYVCGSDRTVGVRILESKKMRRRLR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01936 359 PANTHER EXPRESSED PROTEIN 1 305 IPR008586 -
Aip06g01936 359 Pfam Plant protein of unknown function (DUF868) 40 298 IPR008586 -
Aip06g01936 359 PANTHER FAMILY PROTEIN, PUTATIVE (DUF868)-RELATED 1 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01936 Aip-Chr6 76315839 76318057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01936 1 303 EF-hand Containing Proteins AT3G04860 33.227 2.89e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01936 - - gmx:100785438 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01936 06 76315839 76318057 Aip06g01936 06 76315839 76318057 ECH