Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01930 ATGTTTAGGCCTACTCACATGTCCCCCTTGCTGCTGTTACTATTCCTCTCCCTCGCCACAGCGTTGACATGTTCCGCATCACCACAGATCCACATAGGCTTCTCCGCGTCACCACAATCCCAAACGGCGCCGTTTGAGTCCCTTTTCACCGACCCTACTGGCAATTTCTCTTTATGCTTCCTCCGCCAGAACCAAAACCACCTCGCACTCGCCGTCATCCACGTAGCATCCTTGCAGCCACTCTGGCTCGCTAACCCAACTCACTTGGCCTCATGGTCCCACACCACGCGCCTCTCCTTCAACGGCACTCTTCTCCTCTCCGACCCCAAAACAAACCTCCTCTGGTCAACCGCAACAACCGGCGGCGATACCCTTCTGCTACTTAACACCTCCAACCTTCAGATCCTAAACAAAGCCAAAGCCACTCCCATATGGCAAAGCTTCGATTTCCCCACAAATACTCTCGTTCAGGACCAGAACTTCACAACCGCCATGTCATTATCGTCGCAAAATGGTTTGTACTCGTTGCGGTTAGGCAACGATTTCATGGGGCTCTACGCTAACTACCCTGAAAATGATGCAAGTTCGTTGGGGCAGTTACTCTACTGGAAGCGCACCGCACTGGAGGCCAAAGAAGTTATAAAACAAGGACAGGGACCAATCTACGCACGTGTCAATAAAGAGGGGTATCTCGGCATGTACCAAACCAGCGCCAAGCCCATTGACGTTCAGAAGTTCGACAGCTTCCAACAAACTCCAACGGCATCGTCGTTTCTGTTCGTGCGGTTAGAACCCGATGGGAACCTCAAAGGGTATTATTGGAATTCCAACAAGTCCAGCTGGGTGCTCAACTACCAGGCCATAACGGAAACCTGCGAGCTTCCACTCCCCTGCGGATCGTACGGTTTGTGTACTCCGGGCGGGTCTGGGTGCTCGTGTTTGGATAACCGAACCCGGTTCGAACCGGGTGTTGGTTGCTTCGGTGGTAGCAACGGAAACTTGTGCTCGGAAAAGATTGGTGGAGACAGTTACTCAGTGATTCGAAGGACGGGGGTAGAGCCACCGCATAAGGAGCTGGATGGTCACGTGACGACGCCGTCTTCGGCGGAGTGTGAAGGGTTGTGCGAGAGAAACTGTAGCTGTTGGGGTGCGATGTACAACAACGTAAGCGGGTTTTGTTACATAATGGACTACCCGATTGGGACGATGTCGGGTTCCGGGGAAGAGTACAAGATTGGGTATTTTAAGGTGAGGAAAAGTGAGAGTGGGAAGAATCGGGTTGGGGTTCGGGTTGGGGTGGTGGTTGGGGTTATGGTTGGGATTGTCTTTATTGGGGCTGGGGTGTGGATGATGAGAATGCGGTGGAGAAGGAAAGGGGTCAATGGGATGTTGGGCGAAGAAAACGGGTCTTCACCCGGCCCGTATAGGAATCTTGGATTCGACAGTTTTAAATCCATTGAGATGAGCGGTCAAAGATGA 1479 0.524 MFRPTHMSPLLLLLFLSLATALTCSASPQIHIGFSASPQSQTAPFESLFTDPTGNFSLCFLRQNQNHLALAVIHVASLQPLWLANPTHLASWSHTTRLSFNGTLLLSDPKTNLLWSTATTGGDTLLLLNTSNLQILNKAKATPIWQSFDFPTNTLVQDQNFTTAMSLSSQNGLYSLRLGNDFMGLYANYPENDASSLGQLLYWKRTALEAKEVIKQGQGPIYARVNKEGYLGMYQTSAKPIDVQKFDSFQQTPTASSFLFVRLEPDGNLKGYYWNSNKSSWVLNYQAITETCELPLPCGSYGLCTPGGSGCSCLDNRTRFEPGVGCFGGSNGNLCSEKIGGDSYSVIRRTGVEPPHKELDGHVTTPSSAECEGLCERNCSCWGAMYNNVSGFCYIMDYPIGTMSGSGEEYKIGYFKVRKSESGKNRVGVRVGVVVGVMVGIVFIGAGVWMMRMRWRRKGVNGMLGEENGSSPGPYRNLGFDSFKSIEMSGQR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01930 492 Pfam D-mannose binding lectin 81 173 IPR001480 -
Aip06g01930 492 PANTHER OS11G0149900 PROTEIN 36 478 - -
Aip06g01930 492 PIRSF SLG 1 432 IPR035446 -
Aip06g01930 492 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 281 IPR036426 -
Aip06g01930 492 SMART blect_4 33 151 IPR001480 -
Aip06g01930 492 Gene3D - 37 149 IPR036426 -
Aip06g01930 492 ProSiteProfiles PAN/Apple domain profile. 335 419 IPR003609 -
Aip06g01930 492 Pfam S-locus glycoprotein domain 254 315 IPR000858 GO:0048544
Aip06g01930 492 PANTHER - 36 478 - -
Aip06g01930 492 ProSiteProfiles Bulb-type lectin domain profile. 34 148 IPR001480 -
Aip06g01930 492 SMART ntp_6 339 418 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01930 Aip-Chr6 75090052 75092147 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01930 - - cam:101498584 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01930 06 75090052 75092147 Aip06g01930 06 75090052 75092147 ECH