Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01773 ATGACCATTCAATTCAGTGTCGGCACCGCAGCCGCCACCAGAAGAAAGCTCCGTCACCTGCCGCACGTCTTCAGTCACATCCTGGAGCTCTTGTTCGGTCCGACGTTGATGTTGCTATCAAGGAGGCCTCCGTTGTCACTGAGACCAAAGAGGAGGATGAAGAGGTTGGAGGTGGCGGAGGCAGCGGCGACACTGACAAAGTTGAGGCGGAGGAGAGTGCCAACGAGGGAGGCTTGCGTGAGAGGTTTCACTTACGCCTCAACGCAGCAGCACAAAGATATGGAGACCTTTCTCTTCACCTCCGAATCTGTAAATGAAGGTCACCCTGACAAGATCTGTGACCAGGTTTCGGATGCCATCCTTGATGCTTGTTTGGAGCAAGACCCAGAGAGCAAGGTTGCCTGTGAGACCTGTACAAAAACCAACATGGTTATGGTCTTTGGTGAGATCACAACCAAGGCAAATGTGAACTATGAGAAAATAGTTCGAGACACTTGCAGAGGCATTGGGTTCGTTTCAGCTGATGTTGGTCTTGATGCTGACAACTGCAAAGTTCTGGTCAACATTGAGCAACAGAGCCCTGATATTGCCCAAGGAGTTCATGGTCACATGACCAAAAAGCCTGAGGAAATTGGTGCTGGTGACCAGGGACACATGTTTGGCTATGCCACAGATGAAACACCTGAGCTAATGCCACTTACTCATGTCCTTGCTACTAAACTTGGTGCCAAGCTCACTGAAGTTAGAAAGAACAAAACATGCCCATGGGTGAGACCTGATGGAAAAACACAGGTTACTGTTGAGTACAAGAATGATAATGGAGCCATGATCCCGATTCGTGTGCACACTGTCCTCATCTCAACACAACATGATGAAACTGTCACCAATGACAAGATAGCCAGCGATTTGAAGGAGCATGTAATAAAACCTGTCATCCCAGCTAAATACCTTGATGACAAGACTATCTTCCACCTCAACCCTTCTGGTCGTTTTGTGATTGGTGGACCCCATGGAGATGCAGGACTAACTGGCCGTAAGATCATCATTGACACCTATGGTGGTTGGGGTGCTCATGGTGGAGGTGCCTTCTCCGGCAAGGACCCAACCAAGGTTGATAGGAGTGGTGCATACATTGTTAGGCAAGCAGCAAAAAGTGTGGTAGCTTCAGGGCTTGCTCGACGCTGTCTTGTGCAGGTTTCTTATGCAATTGGAGTCCCAGAGCCACTCTCTGTTTTTGTAGACACCTACAAAACAGGAAAGATTCCAGACAAGGACATATTGGCTCTGATTAAGGAAAATTTTGACTTCAGGCCAGGAATGATTGCCATCAATCTTGACCTCATGAGAGGAGGCAACTTCAGGTACCAGAAGACTGCTGCTTACGGACATTTCGGACGTGACGATCCTGATTTCACTTGGGAGACGGTGAAGATGCTCAAGCCCAAGGCTTGA 1452 0.4862 MTIQFSVGTAAATRRKLRHLPHVFSHILELLFGPTLMLLSRRPPLSLRPKRRMKRLEVAEAAATLTKLRRRRVPTREACVRGFTYASTQQHKDMETFLFTSESVNEGHPDKICDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVNYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHMTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWVRPDGKTQVTVEYKNDNGAMIPIRVHTVLISTQHDETVTNDKIASDLKEHVIKPVIPAKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKENFDFRPGMIAINLDLMRGGNFRYQKTAAYGHFGRDDPDFTWETVKMLKPKA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01773 483 Pfam S-adenosylmethionine synthetase, N-terminal domain 97 194 IPR022628 GO:0004478|GO:0006556
Aip06g01773 483 Gene3D - 104 372 - -
Aip06g01773 483 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 94 483 IPR002133 GO:0004478|GO:0005524|GO:0006556
Aip06g01773 483 SUPERFAMILY S-adenosylmethionine synthetase 96 202 IPR022636 GO:0004478|GO:0006556
Aip06g01773 483 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 2 94 483 - -
Aip06g01773 483 Gene3D - 210 474 - -
Aip06g01773 483 SUPERFAMILY S-adenosylmethionine synthetase 333 480 IPR022636 GO:0004478|GO:0006556
Aip06g01773 483 Gene3D - 97 335 - -
Aip06g01773 483 Pfam S-adenosylmethionine synthetase, central domain 210 331 IPR022629 GO:0004478|GO:0006556
Aip06g01773 483 ProSitePatterns S-adenosylmethionine synthase signature 2. 359 367 IPR022631 GO:0004478|GO:0006556
Aip06g01773 483 Hamap S-adenosylmethionine synthase [metK]. 95 483 IPR002133 GO:0004478|GO:0005524|GO:0006556
Aip06g01773 483 ProSitePatterns S-adenosylmethionine synthase signature 1. 212 222 IPR022631 GO:0004478|GO:0006556
Aip06g01773 483 TIGRFAM metK: methionine adenosyltransferase 98 480 IPR002133 GO:0004478|GO:0005524|GO:0006556
Aip06g01773 483 Pfam S-adenosylmethionine synthetase, C-terminal domain 333 474 IPR022630 GO:0004478|GO:0006556
Aip06g01773 483 SUPERFAMILY S-adenosylmethionine synthetase 208 332 IPR022636 GO:0004478|GO:0006556
Aip06g01773 483 CDD S-AdoMet_synt 98 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01773 Aip-Chr6 43639624 43647955 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01773 K00789 - csv:101222328 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01773 06 43639624 43647955 Aip06g01773 06 43639624 43647955 ECH