Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01700 ATGGATGCCAAAGCCATCAAACTCCAGATCCTGAAGGGGTCCATAGCGAGGCGCGTGTTCTTCCGCTCAATCATGCTCGCTTCCGCCATCTCGATCGTTTCTCTGCTCCGCGCCTTCTCCGCCTTCGACTTGGCTGACTTAGCTCCGGTGACACTGACCTACACCGACTGCGTCGCCGCGGGTTCCGAAATGCGTTTCGAAAACGCCACTCTGCAGAGCCGCGTGCTCAGCACTTTCTGGAGCTCCTTCTACTGCGAGAAAGACGAAAACTTGACGGTCAACGTGGTCAACGACCTTATGAAGAAGCAACTGCTGAATTGCGGAGCCAAGAGCCTCTGCGTCGGAGAAGGTTCGGCGATGGCCGTCGCCGCCATGAAGCACATGGGATTCTCCAGCGTTACCGGTGTCCACAGGCACCGGTTCTTCTCCCTCAAGCAGAAGAAAATCGTGTACGAGCTCAATTACCAGGACTGTTCATTCGATTTCGTGCTGTCAAGGGATCTTGACAAGGTTTCTGTTCCTGCGTTGCTCGTTCTTGAGGTTGAGCGTGTTCTAAAGCCAGGTGGTGTCGGTGCCCTTCTTGTGGGTCCCACTGGCTCCAATTCCATCCCCAACGACCTCATTAGGTCTGCAACACCGGTTTCATCGTTGCTAAGATCTTCCACCGTTCTGCATGTTGGTTCTGTTGGTGATCTCAACCTTGTTGTGTTCAGGAAAAGGGTGGAAAATGATACTGTTTCTGGTGCTTTCTATCAGTATCCACTTCCTGCGGATTGTTCTAGCATAAGTCTTACAAAGCCTTTGATTCAGCTCATGGAGCCTCTTGTGAGTCAGAAGCCGCCACTTGGGTATGAGAAGATGGTACCTTACTTGCCAAAGTTCGTGGATGTTTCTTCTAGGAAGAGGATGGTTTATATTGATATTAATGGGGGGCGAGAGATCCTCAATGCTAATGATAATCCTAGTGATTGGTTCTTGCCATCTTACCCTATTAGTCAAAAGGATTTCAATGTGTATTTTGTTCACTATAACACTTCGGTAATGTTGTCCTATGTGAAGCGACCTGGTGTGACATTTGTTTACTATCCCGGGTTGGCCGGTAAGGCCGCGGCCAAGGCTAATCTTGATGCTGCTGATGATGATGATGGAGATTTGGAACCGTTTGTTGGGGAGGACGAGTTTGATTTCCTTGCTTGGTTCAAGGAAACTGTGCAGTATGCTGATTTTGTTGTCCTCAAAATGAATGCAGGGAATGCTGAAATGAAGTTCCTCTTGGATGTGTTTGAGAGTGGAGCAATATGCTTTGTGGATGAATTGTTTCTGAGGTGCCCAGAGAGTGGAAATGACGATGAGAAAACTGGTATGGGCAAGGATAGCTGCATGGATATTTACAAGGGTCTCAGAAGCAATGGTGTCTACGTTCATCAGTGGTGGGCGGACTAA 1443 0.4893 MDAKAIKLQILKGSIARRVFFRSIMLASAISIVSLLRAFSAFDLADLAPVTLTYTDCVAAGSEMRFENATLQSRVLSTFWSSFYCEKDENLTVNVVNDLMKKQLLNCGAKSLCVGEGSAMAVAAMKHMGFSSVTGVHRHRFFSLKQKKIVYELNYQDCSFDFVLSRDLDKVSVPALLVLEVERVLKPGGVGALLVGPTGSNSIPNDLIRSATPVSSLLRSSTVLHVGSVGDLNLVVFRKRVENDTVSGAFYQYPLPADCSSISLTKPLIQLMEPLVSQKPPLGYEKMVPYLPKFVDVSSRKRMVYIDINGGREILNANDNPSDWFLPSYPISQKDFNVYFVHYNTSVMLSYVKRPGVTFVYYPGLAGKAAAKANLDAADDDDGDLEPFVGEDEFDFLAWFKETVQYADFVVLKMNAGNAEMKFLLDVFESGAICFVDELFLRCPESGNDDEKTGMGKDSCMDIYKGLRSNGVYVHQWWAD 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01700 480 Pfam Methyltransferase domain 150 190 IPR013216 GO:0008168
Aip06g01700 480 PANTHER UPSTREAM ORF PROTEIN, PUTATIVE-RELATED 1 480 - -
Aip06g01700 480 PANTHER PEPTIDE UPSTREAM PROTEIN 1 480 - -
Aip06g01700 480 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 104 197 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01700 Aip-Chr6 35561392 35563629 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01700 - - gmx:100783651 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01700 06 35561392 35563629 Aip02g03360 02 110279324 110280661 PCT