Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01695 ATGATGAACAGCTCGAACGGCATGATGTCCCCGTCGTCATCGGGAACCGCACAGTCCCCTGGGCTCAAGACTTATTTCAAAACCCCTGAGGGCCGATACAAGCTTCAATACGAGAAGACTCACCCTTCTGGTCTTCTTCATTATGCTCATGGCAAAACCGTTACTCAGGTTACTCTTGCACATCTCAAAGACAAACCTGCGCCTTCGACCCCGACTGCGTCTTCTTCAAGTTTCAGTGCCAGCAGTGGGGTGCGGTCTGCGGCAGCTAGATTGTTGGGAGGAAGCAATGGAAGCCGAGCGCTTAGTTTTGTTGGGGGCAATGGTGGAAGCAAGAGTAATGGAGGAACGAGTAGGATTGGTTCAATTGGTGCCTCCAGTTCAAGTAGTTCGCTGGCTAATCCAAATTTTGACGGCAAAGGAACCTACTTGATCTTCAATGTCGGAGATGCAATTTTCATAAGTGATTTGAATTCTCAAGACAAGGACCCAATAAAGTCTATTCACTTTAGTAACTCAAATCCTGTGTGCCATGCATTTGATCCTGATGCTAAGGATGGACATGATTTGCTTGTTGGCTTGACCTCTGGAGATGTCTACTCAGTATCACTGAGACAGCAATTACAGGATGTTGGCAAAAAGCTTGTTGGGGCTCAGCATTACAACAAAGATGGTACCGTCAGTAACAGTCGTTGTACATGCATTGCTTGGGTGCCAGGAGGTGATGGAGTTTTTGTTGTTGCTCATGCTGATGGAAATTTATTCGTATATGATAAGAATAAAGACAGTGCTGGTGATTCTTCATTCCCAGTTGTTAAAGATCAAACTCAATTTTCTGTTGTGCATGCACGTTATAGTAAGAGTAACCCAATAGCCAGATGGCATATATGCCAGGGTTCAATCAACATGTTTTCTTTCTCATCCGATGGAGCATACTTAGCAACTGTTGGAAGAGATGGCTACTTACGAGTGTTTGATTACATAAAAGAACAACTTATATGTGGTGGAAAGAGTTATTATGGGGCTTTGTTGTGTTGTGCTTGGAGCATGGATGGGAAATATGTTTTGACGGGTGGAGAAGATGATTTAGTTCAAGTTTGGAGCATGGATGATCGAAAGATTGTAGCATGGGGTGAGGGACATAACTCATGGGTATGTTGCTTGGTAACATTGAGTTGGAAAATGTTTCTACAATTGTACCGAATTAATGTGTGTCAAATGCTGTGA 1224 0.4371 MMNSSNGMMSPSSSGTAQSPGLKTYFKTPEGRYKLQYEKTHPSGLLHYAHGKTVTQVTLAHLKDKPAPSTPTASSSSFSASSGVRSAAARLLGGSNGSRALSFVGGNGGSKSNGGTSRIGSIGASSSSSSLANPNFDGKGTYLIFNVGDAIFISDLNSQDKDPIKSIHFSNSNPVCHAFDPDAKDGHDLLVGLTSGDVYSVSLRQQLQDVGKKLVGAQHYNKDGTVSNSRCTCIAWVPGGDGVFVVAHADGNLFVYDKNKDSAGDSSFPVVKDQTQFSVVHARYSKSNPIARWHICQGSINMFSFSSDGAYLATVGRDGYLRVFDYIKEQLICGGKSYYGALLCCAWSMDGKYVLTGGEDDLVQVWSMDDRKIVAWGEGHNSWVCCLVTLSWKMFLQLYRINVCQML 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01695 407 MobiDBLite consensus disorder prediction 1 25 - -
Aip06g01695 407 ProSiteProfiles Trp-Asp (WD) repeats profile. 335 376 IPR001680 GO:0005515
Aip06g01695 407 SUPERFAMILY WD40 repeat-like 148 389 IPR036322 GO:0005515
Aip06g01695 407 SMART WD40_4 286 325 IPR001680 GO:0005515
Aip06g01695 407 SMART WD40_4 328 367 IPR001680 GO:0005515
Aip06g01695 407 SMART WD40_4 219 257 IPR001680 GO:0005515
Aip06g01695 407 MobiDBLite consensus disorder prediction 1 23 - -
Aip06g01695 407 MobiDBLite consensus disorder prediction 105 131 - -
Aip06g01695 407 Pfam WD domain, G-beta repeat 298 325 IPR001680 GO:0005515
Aip06g01695 407 Pfam WD domain, G-beta repeat 342 367 IPR001680 GO:0005515
Aip06g01695 407 PANTHER LOW QUALITY PROTEIN: WD REPEAT-CONTAINING PROTEIN 20-LIKE 3 388 - -
Aip06g01695 407 Gene3D - 12 404 IPR015943 GO:0005515
Aip06g01695 407 PANTHER WD REPEAT PROTEIN 3 388 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01695 K24741 - gmx:100782580 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01695 06 35199598 35203184 Aip06g01695 06 35199598 35203184 ECH