Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01549 ATGAGAACAGAGTCCAACAAAATATCCAAGTCTTCGTGGCCAAAACAAGCCGTGAAAAAGTGGCTTAACATAAAGACTAGTGCTGATAAGTTTCACTCAGATTATTGTTTCACAGGAGCAGAAAGGAGGAAGAGTTGTTCGGACAAAGATTGTTACGCCGTCGTCCCAGATAATTTCTCAGAGGGGTGGTTGATGGATTCTAGAAATGGAATGAGAAGTTGGGATCTTGGGAAGGAAGAAACTTGTGTTCCTTTCAGTGATGCTCTCGACCTCAGGATGTTCGTGGGGACGTGGAATGTTGGAGGGAAGTCACCCGATGAAGCTTTGAACTTGAGGGATTGGTTTAAGTCTCCTTCACCAGCTGATGTCGATGTCTATGTAATTGGGTTCCAAGAAATAGTGCCGCTAAACGCAGGGAACGTGCTTGGGCCAGAGGACAGTGGGCCAGCAGCGAAGTGGCTAAGGCTTATGAGGAACGCATTAAACCCAAACATTGAAGAAGAAAAAGGAGGCGTTAAGCAGCAGCAACGGTATTACCTTGCAGCAAGCAGGCAAATGGTTGGAATCTTCTTGTGCGTTTGGGTGCGTGCAGATCTTTACTGCCACGTCACCAATATTAGGGCCTCTTGCGTTGGCACTGGCATTATGGGCTACCTTGGCAATAAGGGCTCAATATCAATTAGCATGAGACTGTACCACACCACGTTCTGCTTCGTCTGCACCCACTTGGCCTCTGGAGAGAAAGACGGCGACGAAATGCGAAGAAACTTGCACGTCTCGGAAATCTTGAAGCGAACTAAGTTTTCGAGTTCCTTCGAGGCTCCTGAAACCATACTTCAACACCATAATATCATATGGCTTGGAGATTTGAATTATCGGCTTGTAGCTGGCTACGATGATACACATGAGCTTCTCAAGAAGAATGATTGGCAGGCACTACTAGAAATGGATCAGCTAAGAATAGAGCAGAAAGCAGGTAGAGTATTTAAAGGTTGGAATGAAGGGGGAATATACTTTGCACCTACATACAAATACTTAGCCAATTCGGACCACTATGTTGCCCAAACTTCCAAGTCCAAGGAAAAAAGACGCACTCCTGCTTGGTGCGATCGAATACTGTGGAAAGGGGAAAGGTTGAAGCAGCTATGGTATGTTCGTGGAGAATCCAAATTCTCTGACCACAGACCAGTGTATTCGATGTTCTTCGCTCAAGTTGATTTGAGGGGCAAAAATGGCATTACTCCTCCTCCTCCCTCTAATGCTGTCACCATTACACGATCATGTTCCTCAAAACCATTGGTAAACGCTGGGCTACCATCGTCTTGCGCCGCGAAAGTGCAGGCAGAAGAGCAGCTCTTGATGCTAACGAGGACACAGAGTTGCATGGACACTGTACAAAGTTTGTGA 1407 0.462 MRTESNKISKSSWPKQAVKKWLNIKTSADKFHSDYCFTGAERRKSCSDKDCYAVVPDNFSEGWLMDSRNGMRSWDLGKEETCVPFSDALDLRMFVGTWNVGGKSPDEALNLRDWFKSPSPADVDVYVIGFQEIVPLNAGNVLGPEDSGPAAKWLRLMRNALNPNIEEEKGGVKQQQRYYLAASRQMVGIFLCVWVRADLYCHVTNIRASCVGTGIMGYLGNKGSISISMRLYHTTFCFVCTHLASGEKDGDEMRRNLHVSEILKRTKFSSSFEAPETILQHHNIIWLGDLNYRLVAGYDDTHELLKKNDWQALLEMDQLRIEQKAGRVFKGWNEGGIYFAPTYKYLANSDHYVAQTSKSKEKRRTPAWCDRILWKGERLKQLWYVRGESKFSDHRPVYSMFFAQVDLRGKNGITPPPPSNAVTITRSCSSKPLVNAGLPSSCAAKVQAEEQLLMLTRTQSCMDTVQSL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01549 468 SMART i5p_5 89 410 IPR000300 GO:0016791|GO:0046856
Aip06g01549 468 Pfam Endonuclease/Exonuclease/phosphatase family 96 394 IPR005135 GO:0003824
Aip06g01549 468 Gene3D Endonuclease/exonuclease/phosphatase 78 412 IPR036691 -
Aip06g01549 468 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 9 167 - -
Aip06g01549 468 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 174 457 - -
Aip06g01549 468 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 9 167 IPR045849 GO:0004445|GO:0046855
Aip06g01549 468 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 174 457 IPR045849 GO:0004445|GO:0046855
Aip06g01549 468 SUPERFAMILY DNase I-like 87 405 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01549 Aip-Chr6 27593688 27597582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01549 69 405 Acyl Lipid Metabolism Gene Families AT1G65580 29.412 3.19e-38 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01549 - - gmx:100777569 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01549 06 27593688 27597582 Aip02g01289 02 28868529 28879342 PCT