Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01546 ATGACACCCGGCGAGCAGAACAGTGGCAAAGAGCTCCGGTGGCGACGTAACAGCTTGCCCCTCTTTCTCGCATGCAGCAGCGCCACCATCACCTCCTCTCTTTTGGTCAGACCTAAATGGCGATTGCGGCAGCTCCTGACGAGCTCCGATGACCGCAATGGTGGCGAGAGAAACCACCGCACATTCCTCTCTTCACGATCACATTCTCTCTCTCTCTCTTCGGGCTCGACAGTGGCATGCAGCTCAGCGACGCGACGGCTTCAACAAATGGTGGCGGTGATAGCTCTGGCAGTGATGGCGATAAAACTGGCCGCGATGAGTATGAATGGCGGCGAATCCTTCCTCTTCCTTGCATCGCGTACCGGACAATTGAGTGCGCGGCCACACCTGATCCCACCACGGCAGACGAACTTCCCTTTTTCGCATTTGGCAGTGTGGGCCAGTGGCACCGCCCAAAATCTAACCGAAAAACCGAGTAGAAGCGAACGACCGTTAGTTAGGAACGGCCGTCACCGTCAAGATCTGCGCTTGTTTGGCTTCACTTCTTCTGAAATAGAGACTTCAATCTTGTACCGTGGGAATCCGAAGGTGCAAGACGCCATGACTGAAATCGTGACGGAAACTGCGAATGCTGAAGAAACAGTTCCAGTTCCCCCAATTGAGACTCCAGAAAAAGTTCCCATGCCTCTTTATTCCTCACATCCACCTCTTAATGAGAGGATTATTTCATCCATGACCAGGAGATCTGTTGCTGCACATCCTTGGCATGACCTTGAGATTGGACCAGGAGCTCCACAGATCTTCAACTGTGTGGTTGAGATTGGGAAAGGAAACAAGGTGAAATATGAACTTGACAAGAAGTCGGGACTTATTAAGGTGGATCGTGTGCTTTACTCATCAGTTGTGTATCCCCACAACTATGGTTTTATCCCACGAACTATCTGTGAGGACGGTGATCCCATGGATGTCTTGGTTATTATGCAGGAGCCAGTTCTTCCAGGGTGCTTTCTTCGTGCCAAAGCTATTGGTCTCATGCCTATGATTGACCAGGGTGAGAAAGATGACAAAATAATCGCTGTCTGTGCTGATGATCCGGAGTATAGACACTACAATGACATCAAGGAGCTTCCTCCACATCGTTTGGCTGAGATCCGTCGTTTTTTCGAAGACTATAAGAAGAATGAGAACAAGGAAGTTGCTGTAAATGACTTTCTGCCTGCTTCAACTGCATTCGAAGCTATCAAGCACTCCATGACTCTGTATGCTGACTATATAGTGGAGAGCTTAAGGCGTTCACAGAAGAAGTGGGCGGTGAAGGCGAGGAGGAGGAACAGTGGTGGATCACAGGCGGCAGGGCGGCGGTGCGGCTTCCCTTCCCTCTCCCAAGATCCGCCGCAAAACTGCCACCGTTATCGAGCCCGAAATGGAGAGGAGAGAGCGCGAATGAGAGGAGGAGCTATTCACTATTGCATCTATTGCTGCAAGGGATTCGTCGTCGTCATTGTTGGGCCATCGCCGAACTGCTGCCGCCATTGA 1536 0.5104 MTPGEQNSGKELRWRRNSLPLFLACSSATITSSLLVRPKWRLRQLLTSSDDRNGGERNHRTFLSSRSHSLSLSSGSTVACSSATRRLQQMVAVIALAVMAIKLAAMSMNGGESFLFLASRTGQLSARPHLIPPRQTNFPFSHLAVWASGTAQNLTEKPSRSERPLVRNGRHRQDLRLFGFTSSEIETSILYRGNPKVQDAMTEIVTETANAEETVPVPPIETPEKVPMPLYSSHPPLNERIISSMTRRSVAAHPWHDLEIGPGAPQIFNCVVEIGKGNKVKYELDKKSGLIKVDRVLYSSVVYPHNYGFIPRTICEDGDPMDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASTAFEAIKHSMTLYADYIVESLRRSQKKWAVKARRRNSGGSQAAGRRCGFPSLSQDPPQNCHRYRARNGEERARMRGGAIHYCIYCCKGFVVVIVGPSPNCCRH 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01546 511 PANTHER BNAC07G03580D PROTEIN 237 430 - -
Aip06g01546 511 MobiDBLite consensus disorder prediction 441 461 - -
Aip06g01546 511 CDD pyrophosphatase 266 418 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aip06g01546 511 Hamap Inorganic pyrophosphatase [ppa]. 266 422 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aip06g01546 511 SUPERFAMILY Inorganic pyrophosphatase 246 437 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aip06g01546 511 Pfam Inorganic pyrophosphatase 270 421 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aip06g01546 511 Gene3D Inorganic pyrophosphatase 249 427 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aip06g01546 511 ProSitePatterns Inorganic pyrophosphatase signature. 317 323 - -
Aip06g01546 511 PANTHER INORGANIC PYROPHOSPHATASE 237 430 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01546 Aip-Chr6 27430045 27446283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01546 K01507 - mnt:21392266 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01546 06 27430045 27446283 Aip02g01278 02 28249700 28252691 PCT