Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01506 ATGCATGCAATAATGCAGTGTGGTTGTGGTAATGTGAATTTCAACGTCCCGCAACCACAAAACAGAGTTTTCAAATTCACTCATCGTCGTCGTCTGCTTCTTCTCCGTCAATCTCTCTCTCTCTCCGTCGCTATCATTTTTCTCTCTCTAAAGCAACAAAACACCAAAAGCGTCTCTGAATTTGACGGCTCCGCTACATTTAGCGATCTGCATCGTGCTGCACCAGATCGGAGCACAGAGATGGAGGAGGCGCTGGAACTGGCGAGGGCGAAGGACACGAAGGAGCGGATGGCGGGAGTGGAGAGACTACACCAGGTTCTAGAATCTTCAAGGAAGGCGCTGACGTCATCGGAGGTTACGTCGCTTGTGGACTCGTGCATGGATCTGCTTAAGGACAACAACTTCAGGGTCTCACAGGGCGCTCTTCAGTCCCTAGCCTCCGCCGCAGTCCTCTCCGGCGACCACTTCAAGCTCCATTTTAACGCCCTACTCCCGGCCGTCGTCGATCGGCTCGGTGACGCCAAGCAACCTGTTCGTGATGCCGCCCGCAGGCTCCTGCTCACTCTCATGGAGGTTTCTTCTCCTACAATAATCGTTGAACGAGCAGGATCCTCTGCGTGGGCCCACAGAAGTTGGAGAGTCAGAGAGGAGTTCACACGAACTGTTACATCAGCAATTAATCTATTTTCATCTACTGAGCTTCCACTTCAACGGGTCATCCTTCCTCCTGTTTTGCATTTGCTCAATGATCCAAACCCTGCCGTTCGTGATGCAGCTATTTTGTGCATTGAGGAGATGTATGCTCAAGCTGGCCCTCAATTTCGTGATGAACTTCAACGCCACAATCTTCCATCATCTTTGGTAAAAGATATTAATGCCAGGCTAGAGGGAATTCAACCAAAAGTCCGCTCTTCAGATGGTGTTCCGAGTGGTTATATCACTGGGGAAATTAAGCCTTTAAATACCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAGACCTCTCTATTTGGAGGGGAAGGTGACGTTACTGAGAAGCCTATAGACCCTATCAAGGTATATTCAGAGAAGGAGTTAACCAGGGAAATTGAGAAGATTGCATCTACTCTTGTACCAGAAAAAGATTGGTCAATTCGTATTGCTGCTATGCAGAGAGTTGAAGGTCTTGTTCTAGGAGGTGTTGCTGATTATCCAAGTTTCCGGGGACTCTTGAAGCAACTTGTTGGACCTTTGAGCACACAGTTGTCCGACAGAAGGTCTAGCATTGTGAAGCAGGCTTGCCATCTACTTTGCTTTTTATCCAAGGAACTCTTGGGGGATTTTGAAGCTTGTGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCAGCAGATAATTGCATAAAAACGATGCTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCTCGTATAGCTGATTGCGCAAAGAATGATCGAAATGCAGTTCTTCGTGCTAGGTGTTGTGAATATGCCCTTTTGGTCCTAGAACATTGGCCTGATGCACCAGAAATACATCGATCAGCTGATTTATACGAGGATATGATAAAGTGTTGTGTTTCAGATGCAATGAGTGAGGTACGATCTACAGCAAGGATATGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCTCGACGTTTATTCTCATCCTTTGACCCTGTAATCCAGAGGTTAATAAATGAAGAGGATGGAGGAATACATAGGCGACATGCTTCCCCTTCCATTCGTGATAAAGGCGCACTGATGACTTTACCAAGTCAAGCCTCTGCTTCCTCTAATGTACCTGGTTATGGAACTTCTGCTATTGTCGCAATGGATAGAAGTTCAAGTGTATCATCAGGGACATCTGTCTCTTCTGGCATACTTCTTTCACAAGCTAAGTCACTTGGTAAGGGTAATGAACGCAGTTTGGAAAGTGTATTGCATGCTAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGAGGCTTGGATTTGTCTGATAAGCATAATTCATCTCTCCGGTCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCAGCTGCTGTTCCTGCGTCTAATCATCTGACAAGCTCTTCAACAACAGAATCAACTACTTCTGGCGTCAATAAAAGTAGTAATCGAAATGGTGGTCTTGGTTTATCTGACATAATCACTCAAATTCAAGCTTCGAAAGATTCTGCCAAGTTTTCATATCATAGTAATGTCAGTGCTGAGACTTTATCATCATTATCTTTATATTCAAGTAAAAGGACTTCTGAAAGATTGCAGGAAAGACGTTCTTTTGATGACAATAGTGACATTCGAGAGGCTAGGAGATTTATGAAGGCCAACACTGATAAGCATTATTTGGATGCTCCATATAGAGATGTAAACTTAAGGGATTCACATAATAGTAATGTGCCTAATTTCCAGAGGCCGCTGTTGAGAAAGAATGTTACTGGGCGTATGTCTGCTGGCAGGAGGAGGAGTTTTGATGATAACCAGCTTTCTCTTGGAGAGGTGTCAAATTATTCAGATGGTCCAGCATCTCTTAATGAAGCTTTGAGTGAAGGACTTACTTCAGGGTCTGACTGGTCTGCCAGGGTTGCTGCCTTCAATTATCTTCACTCTTTGTTGCAGCTAGGTCCAAAGGGGGTTCAAGAAGTTGTCCAAAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCATTTAGATGATCCCCATCATAAGGTTGCACAGGCTGCTCTTTCTACTCTTGCGGATATAGTTGCAGCATGCCGAAAGCCTTTTGAGGGTTACATGGAAAGAATATTGCCACATGTCTTTTCACGTTTAATAGACCCTAAAGAGCTTGTTAGACAGCCTTGTTCAACCACCTTGGAAGTTGTTAGCAAAACTTACAGTATAGATTCACTCTTACCTGCATTGTTACGCTCACTAGATGAACAAAGGTCTCCCAAGGCTAAGTTGGCTGTTATCGAATTTGCCATCAGTTCTTTTAAGAAGCATGCAATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTTGCCAAGTTAGCCCCATTGGTTTATGATAAAAATACAAAACTTAAAGAAAATGCCATTACATGCATTATATCAGTGTACTCCCACTTTGATTCAACTGCAGTTCTTAACTTCATACTTAGTTTGTCAGTTGAAGAACAAAATTCTTTGAGACGAGCACTTAAACAATACACTCCTCGCATTGAAGTAGACCTAATGAATTATCTGCAAAGCAAGAAAGATCGGCGTTCTAAGTCTTCCTTTGATCCTTCTGATGTTGTGGGGTCATCCTCAGAAGATGGATATGTTGGTTTCTCTAGAAAAGCTCAATACCTTGGAAGGTATTCTGCTGGTTCCTTAGATGGTGATAGTGGCAGAAAGTGGAGTTCTCAAGATTCAACCCTGATTAAAGCCAGTCTTGGCCAGACAGCTTCAGTTAATCCAGTGGGACAAAACTTTGGCTCTCAAACTAGCCAACTTGGACATGTGGACAATAGCTTGAATTATGAGGGTCTTTCAATTCCTCATCTTGATGATAATGGTCTGGTGTCATTAGAGCAATTAAATGGTGCTGAAGCATATGTACATGACAAAGAACATTCTTCTGAATTGGAACTGAACCATCACTTAGCTGAAGCTGTAAAGGTTAATTCCATGACTGACACAGGACCCAGCATTCCTCAAATTCTTCATATGATATGCAGCGAGGGTGATGGCAGCCCTATTTCAAGTAAACGGACAGCACTTCAACAGTTAGTTGACGCTTCTATAACAAATGATCATTCTGTTTGGACTAAGTACTTCAATCAGATTTTGACAGTTGTTCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCTTTCTCTTTCACTGATAGTTGAGATGCTTAAAAATCAGAAAGATGCAATGGAGAACTCAGTTGAGATTGTAATTGAGAAGCTGCTTCATGTCACAAAAGATATAATTCCGAAGGTCTCAAGTGAATCAGAGCACTGCCTGAACATTGTTTTGTCCCAGTATGATCCATTCAGATGTTTAAGTGTTATAGTCCCTCTTCTGGTTACAGAGGATGAGAAAACTCTTGTCACTTGCATAAATTGCTTGACAAAGCTTGTTGGCCGGCTGTCTCAGGAGGAACTGATGGCTCAGTTACCTTCATTTCTACCTGCTCTTTTTGAAGCTTTCGGAAACCAGAGTGCAGATGTTCGCAAGACCGTTGTTTTCTGTCTTGTGGACATCTATATCATGCTTGGGAAAGCATTCTTGCCATATTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACTATTTATGCGAATAGAATCTCACAAGCGAGGACAGGCAAAGCCATTGATGCCTCTCATGATTAG 4479 0.4313 MHAIMQCGCGNVNFNVPQPQNRVFKFTHRRRLLLLRQSLSLSVAIIFLSLKQQNTKSVSEFDGSATFSDLHRAAPDRSTEMEEALELARAKDTKERMAGVERLHQVLESSRKALTSSEVTSLVDSCMDLLKDNNFRVSQGALQSLASAAVLSGDHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSSAWAHRSWRVREEFTRTVTSAINLFSSTELPLQRVILPPVLHLLNDPNPAVRDAAILCIEEMYAQAGPQFRDELQRHNLPSSLVKDINARLEGIQPKVRSSDGVPSGYITGEIKPLNTKKSSPKAKSSSRETSLFGGEGDVTEKPIDPIKVYSEKELTREIEKIASTLVPEKDWSIRIAAMQRVEGLVLGGVADYPSFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYALLVLEHWPDAPEIHRSADLYEDMIKCCVSDAMSEVRSTARICYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGIHRRHASPSIRDKGALMTLPSQASASSNVPGYGTSAIVAMDRSSSVSSGTSVSSGILLSQAKSLGKGNERSLESVLHASKQKVTAIESMLRGLDLSDKHNSSLRSSSLDLGVDPPSSRDPPFPAAVPASNHLTSSSTTESTTSGVNKSSNRNGGLGLSDIITQIQASKDSAKFSYHSNVSAETLSSLSLYSSKRTSERLQERRSFDDNSDIREARRFMKANTDKHYLDAPYRDVNLRDSHNSNVPNFQRPLLRKNVTGRMSAGRRRSFDDNQLSLGEVSNYSDGPASLNEALSEGLTSGSDWSARVAAFNYLHSLLQLGPKGVQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVAACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFKKHAMNPEGAANIGILKLWLAKLAPLVYDKNTKLKENAITCIISVYSHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLMNYLQSKKDRRSKSSFDPSDVVGSSSEDGYVGFSRKAQYLGRYSAGSLDGDSGRKWSSQDSTLIKASLGQTASVNPVGQNFGSQTSQLGHVDNSLNYEGLSIPHLDDNGLVSLEQLNGAEAYVHDKEHSSELELNHHLAEAVKVNSMTDTGPSIPQILHMICSEGDGSPISSKRTALQQLVDASITNDHSVWTKYFNQILTVVLEVLDDSDSSIRELSLSLIVEMLKNQKDAMENSVEIVIEKLLHVTKDIIPKVSSESEHCLNIVLSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDASHD 1492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01506 1492 Pfam HEAT repeat 240 267 IPR000357 GO:0005515
Aip06g01506 1492 SMART TOG_3 69 304 IPR034085 -
Aip06g01506 1492 SMART TOG_3 858 1103 IPR034085 -
Aip06g01506 1492 SMART TOG_3 360 592 IPR034085 -
Aip06g01506 1492 SMART TOG_3 1248 1484 IPR034085 -
Aip06g01506 1492 Coils Coil 1328 1348 - -
Aip06g01506 1492 SUPERFAMILY ARM repeat 85 480 IPR016024 -
Aip06g01506 1492 MobiDBLite consensus disorder prediction 303 345 - -
Aip06g01506 1492 ProSiteProfiles HEAT repeat profile. 240 278 IPR021133 -
Aip06g01506 1492 Gene3D - 1275 1484 IPR011989 -
Aip06g01506 1492 Gene3D - 74 301 IPR011989 -
Aip06g01506 1492 Gene3D - 345 584 IPR011989 -
Aip06g01506 1492 Pfam CLASP N terminal 882 1074 IPR024395 -
Aip06g01506 1492 Pfam CLASP N terminal 362 578 IPR024395 -
Aip06g01506 1492 MobiDBLite consensus disorder prediction 681 739 - -
Aip06g01506 1492 PANTHER CLASP 108 1484 - -
Aip06g01506 1492 MobiDBLite consensus disorder prediction 319 339 - -
Aip06g01506 1492 Gene3D - 874 1098 IPR011989 -
Aip06g01506 1492 ProSiteProfiles HEAT repeat profile. 163 201 IPR021133 -
Aip06g01506 1492 SUPERFAMILY ARM repeat 370 1482 IPR016024 -
Aip06g01506 1492 MobiDBLite consensus disorder prediction 712 739 - -
Aip06g01506 1492 PANTHER PROTEIN, PUTATIVE-RELATED 108 1484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01506 Aip-Chr6 25600984 25614774 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01506 K16578 - gmx:100820523 2422.89