Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip06g01463 | ATGGAGGACGAAGCTGACATATACGACGGCGTTAGGGCTCAGTTTCCTCTCAGCTTCGGCAAGCAATCCAAGTCTCAGACCCCTCTCGAAGCCATCCACAACGCCACGCGTCGATCTAATACCAATCCTCCTCCTTCTTCTTCTTCTTCTTCGAAGCTTGCAACCGCAAGCGCTCTTCCTTCTCTCTCTTCTTCTTCTAAGGAATGGCTCAATTCCCTACGCTCCTCTAAAAACCCTACCCCTACACTTGCTGATCGTGGTGGCGGTTCTGAGATTGGCCCGCCGCCACCTCCGCCTCCGACAGCAGAGGATGATAACGACGATGGCGCCATGGTGGGGCCGCCTCCTCCTCCACCTACCGGGGTGGGTTCGGGGGCGGATGAGGACGAAGACGACGATATGATTGGACCGCCCCCGCCGCCGTCTGGTAACAATTTGAACTCCGACGACGACGATGATTCCAATGGAGATGAGTTGGGGAACCGGTTCCGTATTCCACTTAGCAACGAGATTGTCCTCAAGGGCCACACCAAGGTTGTGTCAGCTCTTGCTGTAGATCACACTGGATCTAGAGTGCTTTCTGGAAGTTATGATTACTCAGTGCGGATGTACGATTTTCAAGGAATGAATGCTCGTTTGCAATCGTTTCGACAACTGGAGCCCGCTGAAGGTCATCAAGTTCGCAACTTAAGCTGGAGTCCAACAGCAGATCGGTTTTTGTGTGTGACTGGATCAGCTCAAGCAAAGATTTATGATCGCGATGGGCTTACTTTGGGAGAGTTTATGAAGGGAGACATGTATATTCGTGATCTAAAGAATACCAAGGGCCACATATCTGGATTGACATGTGGAGAGTGGCATCCAAAAACTAAAGAGACAATCTTAACATCATCAGAGGATGGATCACTGCGAATATGGGATGTAAATGACTTCAAAAGTCAGAAGCAGGTAATTAAACCAAAGCTTGCAAGGCCTGGAAGAGTTCCTGTAACCACATGTGCATGGGACCATGATGGTAAACGCATTGCTGGTGGTATAGGAGATGGTTCTATACAGGTTTGGAGCATTAAGCCTGGGTGGGGGAGTAGGCCAGATATACATATTGAAAAAAGTCATTCAGATGATATTACTGGTCTGAAATTTTCTAGTGATGGGAATATCCTATTGTCAAGAAGCTTTGATGGTTCACTGAAGGTTTGGGATATGCGTAAAACAAAGGAAGCATTGAAGGTATTTGAGGATCTTCCAAATAATTACGGACAAACAAATATTGCATTCAGTCCTGGTGAGAATCTATTTTTTACTGGAACATCTGTTGAAAGAGAGAGCACAGTTGGGGGTTTATTGTGCTTCTTTGATAGAGCAAACCTTGAACTTGTTTCAAGAGTCGGCATATCCCCCTCTTGTAGTGTTGTTCGGTGTTGTTGGCATCCTAAACTGAATCAGATCTTTGCAACGGTTGGTGATAAAAACCAAGGAGGGACTCACATACTATATGATCCCACCATCAGTGAAAGAGGAGCCCTTGTTTGTGTTGCACGTGCACCAAGGAAAAAATCAATCGACGATTTTGAGGCAAAGCCTGTCATTCACAATCCCCATGCCTTACCACTGTTTAGAGATCAGCCAAGCCGTAAGCGTCAACGGGAGAAAGTATTAAAGGATCCATTGAAGTCCCACAAGCCTGAACTTCCCATAACAGGACCTGGCTTTGGTGGACGGGTCGGTGCAAGTCAAGGAAGCTTACTAACCCAGTATCTTATGAAGCAAGGAGGTATGATCAAGGAGACATGGATGGAGGAGGATCCAAGGGAAGCCATCTTGAAATATGCTGACGCAGCAGCAAAGGATCCAAAATTCATTGCTCCAGCATATGCAGATACTCAACCTGAGCCAGTGTTCGCAAAGTCGGATTCCGAGGAAGAAGAAAAATGA | 1935 | 0.4693 | MEDEADIYDGVRAQFPLSFGKQSKSQTPLEAIHNATRRSNTNPPPSSSSSSKLATASALPSLSSSSKEWLNSLRSSKNPTPTLADRGGGSEIGPPPPPPPTAEDDNDDGAMVGPPPPPPTGVGSGADEDEDDDMIGPPPPPSGNNLNSDDDDDSNGDELGNRFRIPLSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYSVRMYDFQGMNARLQSFRQLEPAEGHQVRNLSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHISGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRVPVTTCAWDHDGKRIAGGIGDGSIQVWSIKPGWGSRPDIHIEKSHSDDITGLKFSSDGNILLSRSFDGSLKVWDMRKTKEALKVFEDLPNNYGQTNIAFSPGENLFFTGTSVERESTVGGLLCFFDRANLELVSRVGISPSCSVVRCCWHPKLNQIFATVGDKNQGGTHILYDPTISERGALVCVARAPRKKSIDDFEAKPVIHNPHALPLFRDQPSRKRQREKVLKDPLKSHKPELPITGPGFGGRVGASQGSLLTQYLMKQGGMIKETWMEEDPREAILKYADAAAKDPKFIAPAYADTQPEPVFAKSDSEEEEK | 644 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip06g01463 | 644 | MobiDBLite | consensus disorder prediction | 623 | 644 | - | - | |
| Aip06g01463 | 644 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 274 | 309 | - | - | |
| Aip06g01463 | 644 | Gene3D | - | 264 | 500 | IPR015943 | GO:0005515 | |
| Aip06g01463 | 644 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 369 | 410 | IPR001680 | GO:0005515 | |
| Aip06g01463 | 644 | SUPERFAMILY | WD40 repeat-like | 160 | 490 | IPR036322 | GO:0005515 | |
| Aip06g01463 | 644 | PANTHER | GASTRULATION DEFECTIVE PROTEIN 1-RELATED | 3 | 644 | - | - | |
| Aip06g01463 | 644 | Gene3D | - | 166 | 263 | IPR015943 | GO:0005515 | |
| Aip06g01463 | 644 | MobiDBLite | consensus disorder prediction | 1 | 161 | - | - | |
| Aip06g01463 | 644 | MobiDBLite | consensus disorder prediction | 542 | 561 | - | - | |
| Aip06g01463 | 644 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 173 | 207 | - | - | |
| Aip06g01463 | 644 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 274 | 316 | IPR001680 | GO:0005515 | |
| Aip06g01463 | 644 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 330 | 357 | IPR001680 | GO:0005515 | |
| Aip06g01463 | 644 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 369 | 403 | - | - | |
| Aip06g01463 | 644 | MobiDBLite | consensus disorder prediction | 18 | 83 | - | - | |
| Aip06g01463 | 644 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 173 | 214 | IPR001680 | GO:0005515 | |
| Aip06g01463 | 644 | CDD | WD40 | 172 | 490 | - | - | |
| Aip06g01463 | 644 | MobiDBLite | consensus disorder prediction | 542 | 572 | - | - | |
| Aip06g01463 | 644 | Pfam | WD domain, G-beta repeat | 272 | 307 | IPR001680 | GO:0005515 | |
| Aip06g01463 | 644 | Pfam | WD domain, G-beta repeat | 329 | 355 | IPR001680 | GO:0005515 | |
| Aip06g01463 | 644 | Pfam | WD domain, G-beta repeat | 171 | 205 | IPR001680 | GO:0005515 | |
| Aip06g01463 | 644 | Pfam | WD domain, G-beta repeat | 369 | 401 | IPR001680 | GO:0005515 | |
| Aip06g01463 | 644 | PRINTS | G protein beta WD-40 repeat signature | 294 | 308 | IPR020472 | - | |
| Aip06g01463 | 644 | PRINTS | G protein beta WD-40 repeat signature | 342 | 356 | IPR020472 | - | |
| Aip06g01463 | 644 | PRINTS | G protein beta WD-40 repeat signature | 388 | 402 | IPR020472 | - | |
| Aip06g01463 | 644 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 294 | 308 | IPR019775 | - | |
| Aip06g01463 | 644 | SMART | WD40_4 | 311 | 355 | IPR001680 | GO:0005515 | |
| Aip06g01463 | 644 | SMART | WD40_4 | 212 | 252 | IPR001680 | GO:0005515 | |
| Aip06g01463 | 644 | SMART | WD40_4 | 264 | 307 | IPR001680 | GO:0005515 | |
| Aip06g01463 | 644 | SMART | WD40_4 | 166 | 205 | IPR001680 | GO:0005515 | |
| Aip06g01463 | 644 | SMART | WD40_4 | 362 | 401 | IPR001680 | GO:0005515 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip06g01463 | 276 | 474 | Miscellaneous Gene Families | AT5G08390 | 24.000 | 2.33e-07 | 52.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip06g01463 | K24752 | - | gmx:100815380 | 1031.94 |