Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01462 ATGGATGAAGGAGGTAGTTCCAGAGCGGGAATTCGTAGGATCAGTAGTACTACTTTTAGAGAGAGTTTCAAGAACATGTTCATAGAAAGTTCTTCATCACTTTGGAGTAACGATACCACCGGCGTGGAGATGTTTCCCAACAACTTCTCTTTTCACCAAGAAGATGAGGAAGATGATGAGGAAGCTCTCAAATGGGCTGCCATTCAGAAACTACCTACGGTTGCGCGGATGAGGAGAGGATTGCTGGCCACCCCCGAAGGGGTGGCCGACGAGGTGTGCATACCAAAACTTAGGTTGCAAGAAAGAAGAGCTTTGCTTGAGAGATTGGTTAGAGTTGCTGGTCAAGAGGATACAGAGAAGTTCTTCCTCAAACTCCAGGATCGTATTGAAAGGGTTGGTATTACTCTTCCAACAATAGAGGTCCGATTTGAGCATTTGAAGGTGGAAGCAGAAGTTCATCTAGGAACTCGAGCTTTGCCTACCTTCGCTAACTTCATACTCAATATAGTGCAAGGTTTACTAAGAACCCTTCATGTAATTCCCACCAGAAAGCAACAGATAACTATTCTCCAAGATGTCAGTGGAATTATAAGGCCAGCCAGAACAACATTGCTTTTGGGGGCCCCTGGCTCTGGGAAGACTACACTCCTCTTGGCTTTGGCAGGAAAACTTGATTCAAAACTAAAGTTCAATGGTAAGGTTACTTATAACGGTCATGAGATGAATGAATTTATACCTCAAAGAACAGCTGCATATGTCAGTCAGCATGATCTTCATATTGGAGAAATGACTGTTAGAGAAACACTAGCCTTCGCAGCAAGAGTACAAGGAGTCGGAATTCGTTATGACTTGCTACAAGAGGTGTCTAGAAGAGAAAAAGAAAAAAATATTACTCCTGATCGAGATGTTGATGTCTATATGAAGGCTGTAGCAACAGAAGGCCAGAAGACAAATTTGATTACAGATTTTATTCTAAAGGTTTTGGGACTAGAAGTATGTGCTGATACTATTGTAGGAAATGCAATGCTAAGAGGTATTTCTGGTGGGCAAAGAAAACTTCTTACAACAGGAGAGGTGCTGGTTGGATCAGCTAGAGCTCTTTTCATGGATGAAATATCTACTGGTTTAGATAGCTCAACAACTTTTCGAGTTGTGAACTCAGTGAAGCATCTCATCCACTCTCTTAAAGGAACTGCCGTTGTCTCACTCCTTCAACCAGCACCAGAGACTTACAATCTTTTTGATGACATTATTCTACTCTCTGATGGCCACATTGTATATCAAGGTCCCCGTGAACATGTTCTCGAATTTTTCGCCTTCATGGGCTTTAAATGTCCTGAGAGGAAAGGAGTTGCAGACTTTTTGCAAGAAGTGACATCAAGGAAAGATCAGGAACAATATTGGGTACACAAAGATCAACCTTATGAATTTGTGACACCAAAAGAGTTTGCTGAAGCACTGCATTCATTCCATGTTGGGATAAGCATTGATAATGAACTTGCTACACACTTTGACAAGTCTAAAAGCCACCCAGCTGCTTTGGCAACCAAACTTTATGGCATAGGAAAATGGGAACTCTTAAAAGCATGCTTCTCTAGAGAATACTTACTAATGAAGCGCAATTCATTCATTCACATCTTCAAGCTTTGCCAAATTGTTGTAGTGGCCTTCATTGTAATGACGATTTTCTTCCGTACTAATATGCATCGAGATTCTGTGGTTGATGGTGGTATATATGTTGGTGCAATGTACTATTGCATTCTTCTGATTGTGCTAAATGGATTTGCTGATCTTACTGTGACAATTTCTAAGCTTCCTATGTTTTACAAGCAAAGAAACCTTCTCTTCTTCCCTTCATGGGTATATGTTCTCCCTGAGTGGATCCTAAAGCTTCCCATAACTTTCACAGAAGTGGGAATTTGGGTATTTCTTACTTACTATGTAATTGGTTTTGATCCAGATGTTGGAAGATTCTTTAGGCAATTCCTTCTTCTTGTACTTGTTAACCAGATGGCTACTGCCGTATTCCGATTTATTGCAGCACTTGGTAGTAAAGTGGCTTTCACAATTGGCTCATTTACATTGAGCATCCTTGTTATAGTGAGTGGTTTCATCTTGTCAAAAGATAATATGAAAAAATGGTGGTTATGGGGATTTTGGGCATCGCCTATGATGTATGGACAGAATGCCATTGTAAATAATGAGTTTCTAGGCAAGAAATGGAGACACGTTCTGCCTAACTCCACAAAACCACTAGGAATTGAAGTTTTGAAGTCCCGCGGATTCTTCACACAGTCAAATTGGTATTGGATAGGTGTTGGGGCATTGATTGGATATACAATAGTGTTCAACATTGGTTACATCCTTGCTCTTGCTTTCTTGAGTCCAATTGTGCAACAACATGGTGTTAAGTCAGAGCAATCGAAAAGCAATGAGCAGAATCATGGAGGTAACAATGCTCAAAAAGAAGGTGGAGTGGAGAACAATCATAACAGAAAGACAGGAATTATTCTTCCTTTTGAACCATGTGCCGTTACATTTGATGAAATAACTTATTCTGTTGATATGCCACAGGAAATGAGGATCCATGGTGTTCTTGAGGACAGATTATGCCTTTTAAAGGGTATCAACGGCACTTTTCGGCCCGGGGTTCTTACTGCTCTAATGGGTGTTACTGGTGCTGGCAAAACAACTTTGATGGATGTACTCTCTGGTAGAAAAACTGGTGGATATATCGGCGGAAGCATCACGGTTTCTGGTTATCCAAAGAATCAAGAAACCTTTGCAAGAATTTCTGGATACTGTGAACAAAATGATATCCACTCGCCAAACGTCACTGTATATGAATCATTGGTCTACTCAGCATGGCTTAGATTGTCTGCCGAAATCAATGCTGAAACCAGGAAGATGTTCATTGAAGAAGTCATGGAACTTGTGGAGCTGAATCTAATAAGGAATGCAATAGTTGGATTGCCAGGTGTTAACGGTCTCTCAATGGAGCAGCGCAAAAGGTTGACTATTGCAGTTGAGTTGGTGGCTAATCCTTCTATAATATTCATGGATGAACCAATTTCTGGGCTTGATGCAAGGGCTGCTATCATTGTTATGAGAGCAGTTAGGAACATAGCAGATACCGGAAGAACAGTAGTTTGCACCATTCATCAACCTTGCAGTGATATATTTGAATCTTTTGATGAGCTTTTCCTAATGAAAGTAGGAGGACAAGAAATATATGTGGGGCCACTTGGATACCATTGTTCTCATTTAATCAATTACTTTGAGGAAATACAAGGTGTCAGCAAGATTAAAGATGGTTATAATCCAGCTACATGGATGTTGGAAGTAACTTCTTTAGCAAAAGAAATGGAATTGGGAATTGATTTTGCTCAGGAGTACAAAAATTCATCGCTATATAGGTATTTTTCTCTTTTGTATAAATATTCAAATGGTTATTTATCTAAACTGGCCCATGTCATTTGTTTCAGGAGAAACAAAGAACTTATTAATGAATTAAGTATCCCAGTTCAAGGTTCTAAGGACCTTTATTTTCCTTCCAAGTATTCGAGGTCCTTTTTCACACAATGCATGGCTTGCTTATGGAAGCAACATTGGTCTTATTGGCGCAATCCTCCATACACTGCTATAAGATTTCTCTACACCATCGCTGTTGCCCTGTTGTTTGGAACCGTCTTTTGGAACCTTGGCTCCAAAATTGAAAAACGACAAGATCTTTTCAATGCTATGGGATCCATGTATGCTGCTGTTCTTCTTCTTGGTATTAGGAATTCTAGTTCAGCACAACCATTGGTGTTCGTGGAAAGAACAGTGTTCTATAGGGAAAAAGCTGCTGGCATGTACTCAGCTTTTGCATATGCTTTTTCTCAGGTTGTGATTGAACTCCCTTATGTCCTTTTACAAGCTGTGGTGTATGGCATTATAGTTTATGCAATGATTGGTTTTGAGTGGACAGTCACTAAGATTTTCTGGTACTTATTCTTTATGTACTTCACTTTCTTGTACTTCACCTATTATGGCATGATGGCTGCAGCAATGACCCCAACTCCACCAATTGCTGTTATACTTTCATCTGGATTCTATCAAGTGTGGAATCTTTTCTCAGGATTCGCAATTCCACGACCAAGAATTCCTGTGTGGTGGAGATGGTATTATTGGGGAAATCCAGTAGCTTGGACTTTGTATGGATTGGTGGCATCGCAATTTGGAGACATGCAAGACACGATAGCGTTCAATGGCAAACCTACAACAGTAGAAGACTTCTTGAGAAATTATTTTGGTTTCAAGCACGATTTTTTAGGAGTGGTTGGAGTTGTAATTATAGGGTTTGCAGTTACTTTTGCATTGGTCTTTGCCATTGCCATTAAGATGTTTAACTTCCAACGACGCTAA 4407 0.4012 MDEGGSSRAGIRRISSTTFRESFKNMFIESSSSLWSNDTTGVEMFPNNFSFHQEDEEDDEEALKWAAIQKLPTVARMRRGLLATPEGVADEVCIPKLRLQERRALLERLVRVAGQEDTEKFFLKLQDRIERVGITLPTIEVRFEHLKVEAEVHLGTRALPTFANFILNIVQGLLRTLHVIPTRKQQITILQDVSGIIRPARTTLLLGAPGSGKTTLLLALAGKLDSKLKFNGKVTYNGHEMNEFIPQRTAAYVSQHDLHIGEMTVRETLAFAARVQGVGIRYDLLQEVSRREKEKNITPDRDVDVYMKAVATEGQKTNLITDFILKVLGLEVCADTIVGNAMLRGISGGQRKLLTTGEVLVGSARALFMDEISTGLDSSTTFRVVNSVKHLIHSLKGTAVVSLLQPAPETYNLFDDIILLSDGHIVYQGPREHVLEFFAFMGFKCPERKGVADFLQEVTSRKDQEQYWVHKDQPYEFVTPKEFAEALHSFHVGISIDNELATHFDKSKSHPAALATKLYGIGKWELLKACFSREYLLMKRNSFIHIFKLCQIVVVAFIVMTIFFRTNMHRDSVVDGGIYVGAMYYCILLIVLNGFADLTVTISKLPMFYKQRNLLFFPSWVYVLPEWILKLPITFTEVGIWVFLTYYVIGFDPDVGRFFRQFLLLVLVNQMATAVFRFIAALGSKVAFTIGSFTLSILVIVSGFILSKDNMKKWWLWGFWASPMMYGQNAIVNNEFLGKKWRHVLPNSTKPLGIEVLKSRGFFTQSNWYWIGVGALIGYTIVFNIGYILALAFLSPIVQQHGVKSEQSKSNEQNHGGNNAQKEGGVENNHNRKTGIILPFEPCAVTFDEITYSVDMPQEMRIHGVLEDRLCLLKGINGTFRPGVLTALMGVTGAGKTTLMDVLSGRKTGGYIGGSITVSGYPKNQETFARISGYCEQNDIHSPNVTVYESLVYSAWLRLSAEINAETRKMFIEEVMELVELNLIRNAIVGLPGVNGLSMEQRKRLTIAVELVANPSIIFMDEPISGLDARAAIIVMRAVRNIADTGRTVVCTIHQPCSDIFESFDELFLMKVGGQEIYVGPLGYHCSHLINYFEEIQGVSKIKDGYNPATWMLEVTSLAKEMELGIDFAQEYKNSSLYRYFSLLYKYSNGYLSKLAHVICFRRNKELINELSIPVQGSKDLYFPSKYSRSFFTQCMACLWKQHWSYWRNPPYTAIRFLYTIAVALLFGTVFWNLGSKIEKRQDLFNAMGSMYAAVLLLGIRNSSSAQPLVFVERTVFYREKAAGMYSAFAYAFSQVVIELPYVLLQAVVYGIIVYAMIGFEWTVTKIFWYLFFMYFTFLYFTYYGMMAAAMTPTPPIAVILSSGFYQVWNLFSGFAIPRPRIPVWWRWYYWGNPVAWTLYGLVASQFGDMQDTIAFNGKPTTVEDFLRNYFGFKHDFLGVVGVVIIGFAVTFALVFAIAIKMFNFQRR 1468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01462 1468 Gene3D - 176 482 IPR027417 -
Aip06g01462 1468 MobiDBLite consensus disorder prediction 804 825 - -
Aip06g01462 1468 Gene3D - 863 1087 IPR027417 -
Aip06g01462 1468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 869 1081 IPR027417 -
Aip06g01462 1468 Pfam ABC transporter 873 1024 IPR003439 GO:0005524
Aip06g01462 1468 Pfam ABC-2 type transporter 526 736 IPR013525 GO:0016020|GO:0140359
Aip06g01462 1468 Pfam ABC-2 type transporter 1193 1407 IPR013525 GO:0016020|GO:0140359
Aip06g01462 1468 PANTHER ATP-BINDING CASSETTE TRANSPORTER 29 1468 - -
Aip06g01462 1468 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 174 447 IPR003439 GO:0005524
Aip06g01462 1468 CDD ABCG_PDR_domain1 180 429 IPR034001 -
Aip06g01462 1468 Pfam ABC-2 type transporter 405 458 IPR043926 GO:0140359
Aip06g01462 1468 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 29 1468 - -
Aip06g01462 1468 Pfam Plant PDR ABC transporter associated 741 801 IPR013581 -
Aip06g01462 1468 SMART AAA_5 882 1083 IPR003593 -
Aip06g01462 1468 SMART AAA_5 199 424 IPR003593 -
Aip06g01462 1468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 447 IPR027417 -
Aip06g01462 1468 CDD ABCG_PDR_domain2 842 1080 IPR034003 -
Aip06g01462 1468 Pfam ABC transporter 190 372 IPR003439 GO:0005524
Aip06g01462 1468 MobiDBLite consensus disorder prediction 804 831 - -
Aip06g01462 1468 Pfam ABC-transporter N-terminal 116 165 IPR029481 -
Aip06g01462 1468 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 845 1098 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01462 Aip-Chr6 24532637 24548771 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01462 K08711 - gmx:100813417 2235.68