Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01459 ATGAGAAAAACAAACAACAACATTACAGTAACTCAAGCCGTCGAGCAGGAAGAGGAGGAGAGAGGAGCGATTCCAGGAGTCCGCCAGTCACAGAACCGCCGAGCAGAGGCGCCGACGAGACAAAGCTGCCGACGACGACAGGAGGAGGGAGCCGAGCTGTTGAGGAGTGAGGAGGGAGTGGGTCAGCGAACGCTGAAAGGAATGAAGGTCAAAGGTCTGGCTGTCTGGGATCCACCTGAACTCACTTTGCAACTGAATTCATTCCAACTCCCAATGGAAGGAGAACAACAAAGCAGTGGCATATTGAGGTCCATGGACGCGGAGCAACTCAGAGAGCATGCACATAAGATGGTTGATTTTATTGCTGACTACTACAAAACCATTGAGAGTTTCCCAGTTCTCAGCCAAGTTCAGCCAGGTTATCTTGAAAAGCTCTTACCGGATTCTGCTCCTGATTATCCTGAAACACTGGAGCATGTTTTGAATGATGTACAGGAAAAGATTTTGCCAGGGGTAACACATTGGCAAAGCCCCAATTATTTTGCATATTTTCCTTCCAACAGTAGCATTGCTGGATTTCTTGGAGAAATGCTCAGTGCTGGTTTCAACATTGTCGGTTTCAGCTGGATAACTTCTCCTGCCGCAACAGAACTCGAAACCATTGTTCTCGATTGGCTTGCTAAGGCACTTAAGCTGCCTCATGATTTCCATTCTACTGGGCAAGGTGGTGGAGTTATTCAAGGAACAGCGAGTGAAGCAGTTCTAGTTGTCTTGTTGGCTGCTCGCGACAAGATCTTAAGGACGGTTGGAAAAGGCGCTCTTCCTAAGCTTGTGACATATGCATCTGATCAAACACACTCTTCTCTACTAAAAGCCTGCCAGATAGGTGGACTTAATCCTGAGTTTTGCAGGTCACTAAAAACTGATGCTTCAACAAATTATGCGCTTTCTCCTGAAGTATTTTCTGAAGCAGTTTCAAGGGACATTGCTAGTGGTCTTATACCATTTTTCTTATGTGCTACCGTTGGTACAACTTCATCAACTGCTATTGATCCTCTACCTGAATTGGGGAAAATTGCTAAGGTCAAAAACATTTGGTTTCATGTTGATGCTGCTTATGCTGGAAGTGCTTGTGTATGTCCAGAGTATCAACACCATCTCAATGGTGTCGACGAAGCAGACTCATTCAACATGAATGCGCATAAATGGCTCTTGACAAACTTTGACTGTTCACTACTTTGGGTTAAGGATAGAAGTGCTCTGATTCAATCACTATCTACGAACCCGGAGTATCTGAAAAACAAGGCCTCTCAAGGAAATATGGTCATAGATTACAAAGATTGGCAAATTCCCCTGGGGCGTCGCTTTAGATCGTTAAAACTGTGGATGGTGATGCGTCTCTACGGATTGGAAGGTCTGCGAAATCACACGAGAAACCACATTAATCTTGCTGCTTATTTTGAGGACCTTGTTGGTCAGGATCCAAGGTTCAAGGTTGTTACGCCTCGCACGTTCTCTTTAGTCTGTTTTCGGCTTTTGCCTCCGGCTAACACAGAAGATACTAATAAACTGAACCGTGATCTACTTGACTCGGTGAATTCAACAGGAAGTGTTTTCATAACACACACGGTTCTATCAGGTCAGTTCATTCTGCGTTTTGCAGTAGGAGCACCATTGACAGAACAGAGGCATGTCGACGCAGCATGGCGAATTTTGCAAGAAAAGGCCACTGCTCTGCTTGGGAGTTTGTAG 1752 0.4532 MRKTNNNITVTQAVEQEEEERGAIPGVRQSQNRRAEAPTRQSCRRRQEEGAELLRSEEGVGQRTLKGMKVKGLAVWDPPELTLQLNSFQLPMEGEQQSSGILRSMDAEQLREHAHKMVDFIADYYKTIESFPVLSQVQPGYLEKLLPDSAPDYPETLEHVLNDVQEKILPGVTHWQSPNYFAYFPSNSSIAGFLGEMLSAGFNIVGFSWITSPAATELETIVLDWLAKALKLPHDFHSTGQGGGVIQGTASEAVLVVLLAARDKILRTVGKGALPKLVTYASDQTHSSLLKACQIGGLNPEFCRSLKTDASTNYALSPEVFSEAVSRDIASGLIPFFLCATVGTTSSTAIDPLPELGKIAKVKNIWFHVDAAYAGSACVCPEYQHHLNGVDEADSFNMNAHKWLLTNFDCSLLWVKDRSALIQSLSTNPEYLKNKASQGNMVIDYKDWQIPLGRRFRSLKLWMVMRLYGLEGLRNHTRNHINLAAYFEDLVGQDPRFKVVTPRTFSLVCFRLLPPANTEDTNKLNRDLLDSVNSTGSVFITHTVLSGQFILRFAVGAPLTEQRHVDAAWRILQEKATALLGSL 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01459 583 Pfam Pyridoxal-dependent decarboxylase conserved domain 139 512 IPR002129 GO:0016830|GO:0019752|GO:0030170
Aip06g01459 583 MobiDBLite consensus disorder prediction 38 55 - -
Aip06g01459 583 CDD DOPA_deC_like 180 574 - -
Aip06g01459 583 Gene3D - 100 185 - -
Aip06g01459 583 Gene3D Aspartate Aminotransferase, domain 1 479 583 IPR015422 GO:0003824
Aip06g01459 583 PANTHER GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE 105 582 - -
Aip06g01459 583 MobiDBLite consensus disorder prediction 1 55 - -
Aip06g01459 583 SUPERFAMILY PLP-dependent transferases 105 576 IPR015424 -
Aip06g01459 583 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 395 416 IPR021115 GO:0016831
Aip06g01459 583 PANTHER BNAA07G00240D PROTEIN 105 582 - -
Aip06g01459 583 Gene3D - 186 478 IPR015421 GO:0003824
Aip06g01459 583 PRINTS Aromatic-L-amino-acid decarboxylase signature 494 513 IPR010977 GO:0006520|GO:0016831
Aip06g01459 583 PRINTS Aromatic-L-amino-acid decarboxylase signature 177 196 IPR010977 GO:0006520|GO:0016831
Aip06g01459 583 PRINTS Aromatic-L-amino-acid decarboxylase signature 242 262 IPR010977 GO:0006520|GO:0016831
Aip06g01459 583 PRINTS Aromatic-L-amino-acid decarboxylase signature 451 466 IPR010977 GO:0006520|GO:0016831
Aip06g01459 583 PRINTS Aromatic-L-amino-acid decarboxylase signature 133 150 IPR010977 GO:0006520|GO:0016831
Aip06g01459 583 PRINTS Aromatic-L-amino-acid decarboxylase signature 110 129 IPR010977 GO:0006520|GO:0016831
Aip06g01459 583 PRINTS Aromatic-L-amino-acid decarboxylase signature 198 216 IPR010977 GO:0006520|GO:0016831
Aip06g01459 583 PRINTS Aromatic-L-amino-acid decarboxylase signature 151 170 IPR010977 GO:0006520|GO:0016831
Aip06g01459 583 PRINTS Aromatic-L-amino-acid decarboxylase signature 217 236 IPR010977 GO:0006520|GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01459 Aip-Chr6 24453769 24459379 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01459 K01593 - gmx:100791074 823.542