Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01451 ATGCTTCTCAGAAGCTCTTCAACCCCAATTCTTGGTTCCCTCCACTCATCCTTCACAGACAGTCCTAATAACAATAGCATTCACTCTGAGTCCTGCCATGCATTCAAGCATCATCTTCCACCATGTGTCCCTCAACATCATCACCAAAAAATCTCTTTCCATCAATCTCCCTTTATGCAGTTCTCGTGCACTTCCTCTCCAATCTCACCCTCAATCTCTGAAGGCCAATGCAAAGGCTTCAGAAGAGTTCAGTCTGAAGGGAACTTGGAGGATTTAGCTATTGCTACTTGCAACAACAACAATGAAGACATAGTAGGAGATATTCCTTTCAAGAGATTTTCAGCAAGACCAAAGTGTATGGTACTCGAGACTATTCCCTCTTTCTCTGTTACCAAGCACAAAGGCTTGTGCGAAGAAGATGCAGACGATGAAGAAACCGACAGTGACAGTGACATTGAATATGAGAAAGAAAGTGGAAGCTTAATGAATCTTCAAAAGGGTATGGTACTGTCTGAAGAAGTGAGAGATGGAAGCTGCAGGGTAGGTTTTGCTGAGAGGGAAGAAAAGTTTGGTGGTAAACAAATGTATCTTGCAAGAGGGCTTGGAGTTGATGTCTGCGTGGATGGCATAGGTGGCTGCAGGGGTGGTAGAGGTGGTGGCAGTGGTGGTGGTGGTGGTGATTATAACTCCATGAGCTCTGGAGGAAATGATGGAGATAGATCTGAGGTGGAAGAATATTACAAGAAGATGCTGGAAGAAAATCCTGGGAACCCTTTGTTTCTGAGAAATTATGCTCAGTATTTGTATCAGTGCAAAGAAGACCATGAAGGAGCCGAGGAGTATTATTCGCGTGCCATCCTAGCAGATCCAGAAGACGGCGATGTTCTATCACAGTATGGGAAGCTAGTTTGGGAGCTACACAAGGACGAAGAACGAGCGTCAGCCTATTTTGAAAGAGCGGTACAAGCCTCTCCTGAAGACAGCCATGTACATGCAGCGTATGCAAGTTTCCTTTGGGACACAGAGGAGGGTGAGGATGATTGCAATGATTCAGAGTGTTTGCCACCACAATTTCATCAAGGAGCTATGGCTACTGCTGGTGCCTAA 1107 0.4526 MLLRSSSTPILGSLHSSFTDSPNNNSIHSESCHAFKHHLPPCVPQHHHQKISFHQSPFMQFSCTSSPISPSISEGQCKGFRRVQSEGNLEDLAIATCNNNNEDIVGDIPFKRFSARPKCMVLETIPSFSVTKHKGLCEEDADDEETDSDSDIEYEKESGSLMNLQKGMVLSEEVRDGSCRVGFAEREEKFGGKQMYLARGLGVDVCVDGIGGCRGGRGGGSGGGGGDYNSMSSGGNDGDRSEVEEYYKKMLEENPGNPLFLRNYAQYLYQCKEDHEGAEEYYSRAILADPEDGDVLSQYGKLVWELHKDEERASAYFERAVQASPEDSHVHAAYASFLWDTEEGEDDCNDSECLPPQFHQGAMATAGA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01451 368 Gene3D Tetratricopeptide repeat domain 226 346 IPR011990 GO:0005515
Aip06g01451 368 MobiDBLite consensus disorder prediction 218 240 - -
Aip06g01451 368 PANTHER OSJNBA0004N05.2 PROTEIN 1 351 - -
Aip06g01451 368 SMART hat_new_1 238 270 IPR003107 GO:0006396
Aip06g01451 368 SMART hat_new_1 273 305 IPR003107 GO:0006396
Aip06g01451 368 SMART hat_new_1 308 340 IPR003107 GO:0006396
Aip06g01451 368 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 351 - -
Aip06g01451 368 SUPERFAMILY TPR-like 238 343 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01451 - - gmx:100788436 410.609