Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01448 ATGGGAGATAGTGAAACAGTAGTTGCCGAAGCACCTGCAGCTGAGACACATGCTGCTGCTGGGTTTGGTGACTCTGCCTCAAACCCTACTCAGGAAGCAGCTTCTACTGTTGCTGAGCCTGCTGCAGAGGCTGTTACTCAAGCCAATTCAGCTTATGCCTTAGGTTATTCGAATACTGGCGACGGGAATGCTTATGCTGGGGATCCTAATGCTATGCAACCAGAAGCCCAAACCAATTCAATGGAGGATTCCAAGCAAGGTACTGAAGCTCCAAGTGGGCTTGGAAGTGCAGCTACAGGCTCAAGTCAAGTAAATGGTGGTCCAGTGGGTGCAATAGCAAATGCAACAGGACTTGAAAATGGGAATGCATTAGGGAACACTGATGGATCGGCTGATGAGAAACAGCTTGTGGATGGTTATGCTGCCATGTCTGCTGAAGAAGATCGACTGTGGAATATTGTAAGAGCTAATTCTTCAGATTTTACGGCTTGGACTTCCTTGATCGAAGAGACAGAGAAGGTGGCCGAGGATAACATTCTGAAGATTCGAAGAGTTTATGATGCTTTTCTAGCTGAGTTTCCCTTATGTTATGGTTATTGGAAGAAATATGCTGATCATGAGGCACGGCTTGGCTCTGTCGATAAAGTTGTTGAAGTTTATGAACGTGCTGTTCAAGGTGTTACCTATTCAGTGGATATGTGGTTGCATTATTGCATATTTGCTATAGGCACGTATGGGGATCCAGACACTGTGCGTAGGCTTTTTGAACGAGGATTAGCTTATGTTGGGACAGATTATCTTTCTTTTCCTCTTTGGGACAAGTACATTGAATATGAGTACATGCAGCAAGACTGGGCCCGTCTTGCCAATATCTACACTAGAATATTAGAGAATCCAAATCAGCAACTGGATCGATATTTCAACAGCTTCAAGGAGTTAGCTGCAAATCGACCTCTTTCAGAGCTACAAACTGCTGATGAAGCTGCTGTAGTGGCAGGTGCTGCTTCAGAGGCTGCTGACCAAACTGTTGAGGGAGAGGTTCGTCCTGATGGTGCAGAAAATTCTCCTAAACCTGTAAGTGCTGGATTAACAGAAGCAGAAGAGTTGGAGAAGTATATCGCCATTAGAGAAGAGATGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGGAGGCCATACTTTCATGTACGGCCACTCAATGTTGGAGAGCTTGAAAATTGGCATAATTATCTGGATTTTATAGAGAGGGAAGGTGACTTAAGCAAGATTGTCAAGTTATATGAGCGGTGTGTCATTGCATGTGCCAATTACCCTGAGTACTGGATACGCTATATTTTGTGTATGGAAGCCAGTGGAAGTATGGATCTTGCAAATAATGTGCTTGCTCGGGCAACCCAAGTCTTTGTCAAGAGGCAACCTGAAATACATCTTTTTTCTGCTCGGTTTAAGGAGCAGTCTGGAGATATAGCTGGTGCTAGAGCTGCCTATCAACTTGTTCATACTGAAATTTCTCCTGGTCTTCTTGAAGCGATAATCAAGCACGCGAATATGGAACATCGACTGGGAAAGTTGGAGGATGCCTTCTCTTTGTATGAACAAGCCATTGCCATTGAAAAGGGAAAAGAACATTCCCAAACATTGCCGATGCTGTTTGCTCAATTTTCTCGATTCGTCTATTTGGCTTCTGGGAATGCAGAAAAGGCAAGACAGATTCTAGTTGAAGGGGTTGAGAATGTTATGATGTCGAAACCGCTACTTGAGGCTTTATTGCATTTTGAGGCTATTCAGCCCCCACCAAAGCGAGTTGATATGAACTATTTGGAGTCATTGGTAGTCAAATTTATAATGCCTAACCCTGAGAGTCCTGGTGTTGTAAGTGCAGCTGAGCGGGAGGAACTTTCTAGCATTTTTTTGGAGTTTTTGAATCTCTTTGGAGATGTCCAATCTATCAAGAGGTGTGAGGATAGGCATGCCAAATTGTTCTTGCCACACAGGAGCATGTCAGAGTTAAAAAAACGTCATGCTGAGGACTTTTTAGCTTCAGATAAAGCAAAAATGGCAAGATCTTATTCTGTTCCATCAGCTGCTCAATCTGCAGTGGGTGCATATCCAAATGCACAGAATCAGTGGGCTAATTATGGTGTACAACCTCAAGCTTGGCCACCAGCCACACAGGCACAACAGTGGCCTGCTGGCTACACTCAGCCGGTATATCTATCATTTCTCTTTTACGTGCTTGTTTGCTCTGCATGA 2277 0.4383 MGDSETVVAEAPAAETHAAAGFGDSASNPTQEAASTVAEPAAEAVTQANSAYALGYSNTGDGNAYAGDPNAMQPEAQTNSMEDSKQGTEAPSGLGSAATGSSQVNGGPVGAIANATGLENGNALGNTDGSADEKQLVDGYAAMSAEEDRLWNIVRANSSDFTAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARLGSVDKVVEVYERAVQGVTYSVDMWLHYCIFAIGTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLANIYTRILENPNQQLDRYFNSFKELAANRPLSELQTADEAAVVAGAASEAADQTVEGEVRPDGAENSPKPVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYILCMEASGSMDLANNVLARATQVFVKRQPEIHLFSARFKEQSGDIAGARAAYQLVHTEISPGLLEAIIKHANMEHRLGKLEDAFSLYEQAIAIEKGKEHSQTLPMLFAQFSRFVYLASGNAEKARQILVEGVENVMMSKPLLEALLHFEAIQPPPKRVDMNYLESLVVKFIMPNPESPGVVSAAEREELSSIFLEFLNLFGDVQSIKRCEDRHAKLFLPHRSMSELKKRHAEDFLASDKAKMARSYSVPSAAQSAVGAYPNAQNQWANYGVQPQAWPPATQAQQWPAGYTQPVYLSFLFYVLVCSA 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01448 758 PANTHER PRE-MRNA-PROCESSING FACTOR 39 31 736 - -
Aip06g01448 758 MobiDBLite consensus disorder prediction 72 109 - -
Aip06g01448 758 MobiDBLite consensus disorder prediction 64 111 - -
Aip06g01448 758 MobiDBLite consensus disorder prediction 340 359 - -
Aip06g01448 758 Gene3D Tetratricopeptide repeat domain 406 707 IPR011990 GO:0005515
Aip06g01448 758 SMART hat_new_1 426 458 IPR003107 GO:0006396
Aip06g01448 758 SMART hat_new_1 530 565 IPR003107 GO:0006396
Aip06g01448 758 SMART hat_new_1 246 281 IPR003107 GO:0006396
Aip06g01448 758 SMART hat_new_1 177 209 IPR003107 GO:0006396
Aip06g01448 758 SMART hat_new_1 283 316 IPR003107 GO:0006396
Aip06g01448 758 SMART hat_new_1 571 603 IPR003107 GO:0006396
Aip06g01448 758 SMART hat_new_1 211 243 IPR003107 GO:0006396
Aip06g01448 758 MobiDBLite consensus disorder prediction 1 42 - -
Aip06g01448 758 Gene3D Tetratricopeptide repeat domain 152 321 IPR011990 GO:0005515
Aip06g01448 758 SUPERFAMILY TPR-like 370 673 IPR011990 GO:0005515
Aip06g01448 758 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 31 736 - -
Aip06g01448 758 SUPERFAMILY TPR-like 154 316 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01448 Aip-Chr6 23984531 23991256 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01448 K13217 - gmx:100787373 1211.05