Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01421 ATGGCAAGCGCAGGGCTCTATCGTAGAGCTCTCCCTTCTCCTCCTGCAATCGACTTCTCCTCCCCTCAAGGCAAGAAGATCTTTGCTGAAGCTCTAGCTCATGGAACCATGGAGGGGTTCTTCAAGTTGATATCTTACTACCAAACACAATCAGAGCCTGCTTACTGCGGACTCGCCACACTTGCTGTTGTCCTTAATGCTCTATCCATTGATCCTGGTAGAAAATGGAAAGGTCCTTGGAGATGGTTTGATGACTCTATGCTGGATTGCTGTGAGCCTTTGGAAAAAGTCAAAGCAGAAGGAATCACATTTGGCAAAGTTGCGTGCTTGGCTCGGTGCAATGGGGCTAGAGTTGAAGCTTTTCATTCAGACGGAAGTACCATTGATGATTTTCGCAAGCGTGTGATCTCGTGCTGTTCCTCCGAGGATTGCCATGTGATTGTGTCTTATCACCGAGCAGCTTTCAATCAGACTGGTACTGGCCATTTTTCACCAATCGGAGGATATCACGCCGAAAGGGATATGGTTCTCATTCTGGATGTTGCTCGTTTTAAATATCCTCCTCATTGGGTTCCCACTTCTCTTCTCTGGGATGCCATGAATACAATTGATAAATCAACTGGACATCGCAGGGGGTACATGATTATTTCAAGACTTAATAGGGCACCATCAATACTTTATACTGTGAGTTGTAGACATGAGGGTTGGAGCAGTATCGCCAAATTCTTAGCCGAAGATGTTCCTATCCTTCTAAAGTCAGACGATTTAAAAGACATGCATGATGTACTCTCTCTTGTATTTAAGTCTCCTCCTAATAAATTAAGAGGGTTCATCACATGGGTTGCTGAAGTTCGTCGGCAAGAAGATGGGAATCTCACACTGAGCGAAGAGGAGAAAGGAAGGCTAGCTATCAAGGCAGACATATTGGAACAGATAAGGACAACTGTGCTCTTCAAACATGTGACCAGGTGGTTGGTTTCGGAAAGTTCGTGCTGCAACAATGGTTCAAAACTTGGCGACAAAGATATTTTACCAGAACTTGCCGCAAACATTTGTTGCCAAGGGGCAGATCTTTTGAATGGTTGCAGTAGGTCAGGTGGAAAATGCTGTGGACAAATAGACCTAAAGCATCTGAATATCGATGGTGAAAATCAAGCAACGCTGGTTTCTGGAACTGTTACAACTGGTGGCAGCAACGAACAAGGAGTTGATGTTTTGGTCCCTTTGTGTAAGAGAGAACCGAATAGTTTGTGTTTTTCTGATGAAGGTCAGTGCATCGGAATGCACCCTTCTACGGCAGATGTCTTAACAGTGCTTCTATTGGCGCTGCCGTTGCATACTTGGTCAGGCATTAAGGAAGAAAAGCTGCGTGAAGAAGTTAATAGCGTTCTAACAACTGAAAATCTTCCTCCCTTACTTCAGGAAGAGGTTTTGTTCCTGCGAGAGCAGCTCTGTTTTCTCATGATGGATATTGGTGCTTCTTCTGTTCCTTAA 1494 0.4458 MASAGLYRRALPSPPAIDFSSPQGKKIFAEALAHGTMEGFFKLISYYQTQSEPAYCGLATLAVVLNALSIDPGRKWKGPWRWFDDSMLDCCEPLEKVKAEGITFGKVACLARCNGARVEAFHSDGSTIDDFRKRVISCCSSEDCHVIVSYHRAAFNQTGTGHFSPIGGYHAERDMVLILDVARFKYPPHWVPTSLLWDAMNTIDKSTGHRRGYMIISRLNRAPSILYTVSCRHEGWSSIAKFLAEDVPILLKSDDLKDMHDVLSLVFKSPPNKLRGFITWVAEVRRQEDGNLTLSEEEKGRLAIKADILEQIRTTVLFKHVTRWLVSESSCCNNGSKLGDKDILPELAANICCQGADLLNGCSRSGGKCCGQIDLKHLNIDGENQATLVSGTVTTGGSNEQGVDVLVPLCKREPNSLCFSDEGQCIGMHPSTADVLTVLLLALPLHTWSGIKEEKLREEVNSVLTTENLPPLLQEEVLFLREQLCFLMMDIGASSVP 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01421 497 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Aip06g01421 497 Pfam Domain of unknown function (DUF1984) 231 484 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Aip06g01421 497 Gene3D - 16 221 IPR038156 -
Aip06g01421 497 SUPERFAMILY Cysteine proteinases 13 217 IPR038765 -
Aip06g01421 497 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 491 IPR040409 GO:0016756|GO:0046872|GO:0046938
Aip06g01421 497 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Aip06g01421 497 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01421 Aip-Chr6 23201571 23205587 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01421 K05941 - gmx:100782042 814.683