Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01420 ATGGCGACGGCGGGGTTGTATCGGCGGTTTCTTTCGTGCCCCCCCGCCGTGGAATTCGCTTCCTCTCCAGGCAAGCAACTGTTTCTTGAAGCTATTCAGAACGGAACCATGGAAGGCTTCTACAGGTTGGTCTCTTATTTCCAGACCCAATCGGAACCCGCCTACTGCGGCCTCGCAAGCTTATCCATGGTCTTAAATGCTCTTGCCATTGATCCTGGTCGCAAATGGAAAGGACCTTGGAGATGGTTTGATGAATCTATGTTGGACTGTTGTGAGCCTCTTGAAAAGGTCAAAGCTAAAGGCATCTCCTTTGGGAAGCTCGTGTGCTTGGCTCATTGTGCTGGAGCAAAAGTTGAAGCCTTTCATGCTAGCCAGAGCAGCATCGATGCTTTCCGTGAATATGTCATGAATTGTTCAGCTTCTGATGAGTGTCATGTCATCTCTTCGTACCACAGGGCTGCTCTCAAACAAACTGGAACTGGTCATTTTTCACCTATTGGAGGCTATCATGCTGGGAAGGACATGGCGCTTATTTTGGATGTTGCACGATTTAAGTATCCCCCTCATTGGGTTCCACTTTCGCTTCTCTGGGAAGGCATGAACTATGTTGACGAATCCACTGGACAAACTAGGGGGTTCATGCTTATATCAAGACCACATAGGGAACCTGGCATGCTTTATACTCTGAGCTGCAAACATGAGAGTTGGATTAGTATTGCGAAATTCCTAATGGATGATGTTCCTCTTCTATTAAAATCAGAGGATGTGAAAGACATTCAAATGGTTCTTTCAATAATAGTCACATCACTTCCATCTAAATTTGAGGAATTTATCAAATGGGTTGCGGAGATCAGGAGGCGAGAAGATGGTGGTCCAAGTTTAAGCCCAGAGGAGAAAGCAAGGCTTGGTGTTAAGGAAGAGGTATTGAAACAAGTGCAGGAGACAGGGCTTTTCAAACATGTGATTCGCTTTATGTCAACTTCTTGCAGCATACATTCACCCACTTCAGGTGATGGAGACACCTTACCTGACATTGCTGCAAATGTTTGTTGCCAAGGAGCAGAAATTTTAGGTGGGAAAATTAGCTCATCGGCGGAGTATTGCTGTCATGAAACATGCTTGAAATGCTGTAAAGCTGAAGATGAAAAACCAGTAACAATGGTTTGTGGGACTGTGGTAAATGGCAACAGTGAGCAAGGGGTTGATGTGCTGATTCCTTCTGCTAGAAAATCATGTTGCACTTGCTCTAGCCTAAGTAATTCCATTAGGATGCACCCAGCTAGCACAGATGTGCTAACTGTGCTTTTACTGTCCTTACCATCTACGACATGGTCTGATATCAAAGATGAGCGGCTCTTGAGGGAAATAAATAGCCTGGTTTCAGTTGAAAATCTTCCTACTTTGCTTCAAGAAGAGGTTCTGCACTTAAGACGTCAGCTACATCTTCTGAAGAAATGTCAAGAGGATAAGGTAGATGAGGATCTCCATGCGCCTTTCTCTTAG 1503 0.4491 MATAGLYRRFLSCPPAVEFASSPGKQLFLEAIQNGTMEGFYRLVSYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKAKGISFGKLVCLAHCAGAKVEAFHASQSSIDAFREYVMNCSASDECHVISSYHRAALKQTGTGHFSPIGGYHAGKDMALILDVARFKYPPHWVPLSLLWEGMNYVDESTGQTRGFMLISRPHREPGMLYTLSCKHESWISIAKFLMDDVPLLLKSEDVKDIQMVLSIIVTSLPSKFEEFIKWVAEIRRREDGGPSLSPEEKARLGVKEEVLKQVQETGLFKHVIRFMSTSCSIHSPTSGDGDTLPDIAANVCCQGAEILGGKISSSAEYCCHETCLKCCKAEDEKPVTMVCGTVVNGNSEQGVDVLIPSARKSCCTCSSLSNSIRMHPASTDVLTVLLLSLPSTTWSDIKDERLLREINSLVSVENLPTLLQEEVLHLRRQLHLLKKCQEDKVDEDLHAPFS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01420 500 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 494 IPR040409 GO:0016756|GO:0046872|GO:0046938
Aip06g01420 500 Pfam Domain of unknown function (DUF1984) 231 480 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Aip06g01420 500 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 5 494 - -
Aip06g01420 500 Gene3D - 16 220 IPR038156 -
Aip06g01420 500 SUPERFAMILY Cysteine proteinases 14 217 IPR038765 -
Aip06g01420 500 Pfam Phytochelatin synthase 10 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Aip06g01420 500 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01420 Aip-Chr6 23195216 23198959 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01420 K05941 - gmx:547627 834.713