Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01416 ATGAACATCTTCTCCAAGAAACCCACTGCTAAAGAGGCTCTTCGCGAGAGTAAACGCGAAATGACAACTGCTACCAGAGGTATAGAGAGGGAAATTGGAGCATTACAATTGGAAGAAAAGAAGCTTCTTGCTGAGATAAAGAGAACTGCTAAGACGGGAAACGAGGCTGCAACTAAAGTTCTTGCTCGACAGTTGGTAAGGCTTAGGCAGCAGATTGCTAACCTTCAAGGTAGTCGAGCTCAGATGAGAGGCATAGCAACTCACACACAGGCTATGCATGCCCATTCTTCTGTTGCTGCTGGTATGCAAGGAGCTAGTAAGGCAATGGCAGCTATGAATAAGCAAATGGCACCAGCCAAGCAAGCCAAAGTTATACAAGACTTCCAGAGACAATCAGCGCAGATGGATATGACTACTGAGATGATGTCTGATACCATAGATGATGCATTGGATAATGATGAAGCCGAAGAGGAGACTGAAGATTTGACAAACCAGGTCCTTGACGAAATTGGAGTGGATGTTGCATCACAGGTACGAATCAGCTGTTATTAA 552 0.4475 MNIFSKKPTAKEALRESKREMTTATRGIEREIGALQLEEKKLLAEIKRTAKTGNEAATKVLARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAAGMQGASKAMAAMNKQMAPAKQAKVIQDFQRQSAQMDMTTEMMSDTIDDALDNDEAEEETEDLTNQVLDEIGVDVASQVRISCY 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01416 183 MobiDBLite consensus disorder prediction 1 22 - -
Aip06g01416 183 Pfam Snf7 16 173 IPR005024 GO:0007034
Aip06g01416 183 Gene3D - 4 179 - -
Aip06g01416 183 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 3 2 180 - -
Aip06g01416 183 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 2 180 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01416 Aip-Chr6 23175403 23178714 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01416 K12192 - vvi:100242937 293.893