Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01391 ATGGACAAGTTGAATCTTTCTCAACTGGGCGAGAAGCTGATGACGAGTGGGGCCCAAATGGGGCGAATGATGAGCGTCAAGATGAAGGAGGTGAAGGAGATGCTCCAGGCACCCACACCCGAATCCAAGATGGTCGAAGACGCCACCTCTGAAACCCTATCGGACCCTAATTGGGGCACTAACCTCAGGATCTGTGCCATGATCAACTCCGACCAACTCAACGGCTCTGAGGTTGTTAGGGCCATCAAGAGGAGACTCTCTCACAAGAACCCACTCGTTCACTCACTCACCCTTGACCTTCTCGAAGCCTCCGCCATGAACTGCGACAAAGTCTTCTCCGAGATCGCATCCGAGAAGCTTCTCGATGAAATGCTCGCCAAGCTCCTTGATAACCCTCAAGCTGATCCCAATGTTCGTCGCAGGGCGTTTCACCTCATTAGGGCTTGGGGCCAGTCTCAGGATCTCGCTTATCTCCCTGTCTTTCGTCAAACTTACACGAGTTTGCAAGAAAGGGCTGAACCAGTTGATGTAGGAGGAGGAAGTTCGCCCGGTGTTCCTCACAATTTAGGGTCTTATCTTCAACAACAGGGATTAGACCCTCCTTCAAGCTACCCTGTTCCCGAAGCTGGACTAGTTTCTATGGATGACTTAGCTTTTTCTTCCGGTCTCCAACACATGTCAGCTGAAGAGAAGAAAGAGCTTCTTGTAGTTGCACGAAACAGTCTTGAATTGCTATCTAGCATAATAAATTCTGAGGCAGAGCCCAAAACCTTGAAGGAAGATTTAACTCTCAGTTTGCTGGACAAGTGCAAGCACTCACTCTCTATCATGAAGGAAATTGCGGAAAGCACCACAGATGATGAAGAGACACTTTTTGAGGCTTTGTATCTTAATGATGAGCTGCAGCAGATAGTTTCCAAGTACGAGGAGTTGGAGGCTGCTCAACGGCCTGTGGCACAAGAGCCTCCAAATGCTGACACTGCAAAGCATGATGCGGAAGCTGTTCAAAATCCTATTGAACTTCCTAAAAGATTTGAAGAGGATGAGTCCGAAGAGTTCGAAGCTGCTCAGGAACTTGAAAGAAAGCTTCCCAAAAAGTCCAACGGTGTTGAAGCCAATGCAGCCAATGGGGATGGTCATCACGTTGAAACCACAATACTAGATGAGGCAGATGAGAAGGGCAACGCCGTATCTAGCCTCGAGCAATAG 1209 0.4864 MDKLNLSQLGEKLMTSGAQMGRMMSVKMKEVKEMLQAPTPESKMVEDATSETLSDPNWGTNLRICAMINSDQLNGSEVVRAIKRRLSHKNPLVHSLTLDLLEASAMNCDKVFSEIASEKLLDEMLAKLLDNPQADPNVRRRAFHLIRAWGQSQDLAYLPVFRQTYTSLQERAEPVDVGGGSSPGVPHNLGSYLQQQGLDPPSSYPVPEAGLVSMDDLAFSSGLQHMSAEEKKELLVVARNSLELLSSIINSEAEPKTLKEDLTLSLLDKCKHSLSIMKEIAESTTDDEETLFEALYLNDELQQIVSKYEELEAAQRPVAQEPPNADTAKHDAEAVQNPIELPKRFEEDESEEFEAAQELERKLPKKSNGVEANAANGDGHHVETTILDEADEKGNAVSSLEQ 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01391 402 Gene3D - 229 323 IPR038425 -
Aip06g01391 402 ProSiteProfiles VHS domain profile. 48 176 IPR002014 GO:0035091|GO:0043130
Aip06g01391 402 Pfam VHS domain 42 152 IPR002014 GO:0035091|GO:0043130
Aip06g01391 402 ProSiteProfiles GAT domain profile. 226 313 IPR004152 GO:0035091|GO:0043130
Aip06g01391 402 MobiDBLite consensus disorder prediction 382 396 - -
Aip06g01391 402 Gene3D - 32 177 IPR008942 -
Aip06g01391 402 SMART VHS_2 41 172 IPR002014 GO:0035091|GO:0043130
Aip06g01391 402 SUPERFAMILY GAT-like domain 201 312 - -
Aip06g01391 402 PANTHER TOM1-LIKE PROTEIN 1 1 359 IPR044836 GO:0035091|GO:0043130|GO:0043328
Aip06g01391 402 PANTHER TOM1-LIKE PROTEIN 2 1 359 - -
Aip06g01391 402 CDD VHS 42 168 - -
Aip06g01391 402 Pfam GAT domain 239 312 IPR004152 GO:0035091|GO:0043130
Aip06g01391 402 SUPERFAMILY ENTH/VHS domain 37 170 IPR008942 -
Aip06g01391 402 MobiDBLite consensus disorder prediction 315 402 - -
Aip06g01391 402 MobiDBLite consensus disorder prediction 336 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01391 Aip-Chr6 22289467 22291592 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01391 - - gmx:100803803 494.967