Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01215 ATGGTGAGATCAGAGTTGAAAAAGCAGAGCAACAACAACCATGTGAATGTGATTGTGATTGTGTTGATCAAGCTTGCACTGTCATGCCTCTTGTTGGGTCTAGCCATCCACCTCCTCTTCTTCTTCTCTGATTCATCCCACAATGAGCTTCTCCGTGCTTCAACCAACCAAACACAAACCGCCGCTAACAATAATGTGGATGAACAAGAAGAAGAAGAAGAAGAAAAGTGTGATCTTTTTGTGGGAGATTGGGTGGCTGACCCATCTCCCCCACTCTATACTAATGAAAGCTGCCTTCTCATTGAAGATCACCAGAACTGCATGAGGAATGGACGCCCTGATTCTGAGTTCCTCTACTGGAGGTGGGCCCCACGGGCCTGTGGGCTACCCAGGTTCAGCCCAACCAAGTTCCTTCATATGATGAGGGATAAATCATGGGCTTTCATTGGTGACTCCATCTGCCGTAACCATGTTCAGTCTCTACTCTGCATTCTCTCCCAGATAGAAGCAGCCCAAGAGGTGTACCATGATGAGGAATTTAAATCAAAGATATGGAAGTTCCCTTCTTACAACTTCACACTCTCAGTAATATGGACCCCGTTCCTTATCAAAGCAGATATATTCGAAGACTCAAACGGAGTTTCGTCCTCTGAAATCCAGCTTCATCTCGACACCCTGGATCACAAATGGACCAACCAATACCACAATTTCGACTACGTCGTCATAGCCGGAGGCAAATGGTTCCTCAAGACCGCAATCTACCACGAAAACAGAACCGTCAGGGGATGCCATTATTGCCCTGGAAAGAATCTGACGGAGCTAGGATTCGACTACGCATACCGCAAGGCGTTGCGGCAGGTCTTCCATTTTCTAACAAACTCTAACCATAAAGCAACCGTTTTCTTCAGAACTACCACACCGGATCACTTTGAGAATGGAGAATGGTTCAGTGGTGGTTATTGCAATAGAACAGTACCTTTCAAAGAGGATCAAGTGAGGCTAAGTGACGTAGATTCCATCATGCGAGGGATTGAACTCCAAGAGCTTGAGAAGGCGACAGCGTGGGAACATGGCGCCAGGCTGAAACTTTTGGACACGACAAGATTGGCTTTGTTGAGGCCTGATGGACATCCAGGACCGTACAGACAGTTTCATCCCTTTGCAAATGATATGAATGCGAAAATTCAGAATGATTGTTTGCATTGGTGTTTGCCGGGACCAATTGATTCATGGAATGATATTCTACTACAAATGTTGCTCAAT 1263 0.4592 MVRSELKKQSNNNHVNVIVIVLIKLALSCLLLGLAIHLLFFFSDSSHNELLRASTNQTQTAANNNVDEQEEEEEEKCDLFVGDWVADPSPPLYTNESCLLIEDHQNCMRNGRPDSEFLYWRWAPRACGLPRFSPTKFLHMMRDKSWAFIGDSICRNHVQSLLCILSQIEAAQEVYHDEEFKSKIWKFPSYNFTLSVIWTPFLIKADIFEDSNGVSSSEIQLHLDTLDHKWTNQYHNFDYVVIAGGKWFLKTAIYHENRTVRGCHYCPGKNLTELGFDYAYRKALRQVFHFLTNSNHKATVFFRTTTPDHFENGEWFSGGYCNRTVPFKEDQVRLSDVDSIMRGIELQELEKATAWEHGARLKLLDTTRLALLRPDGHPGPYRQFHPFANDMNAKIQNDCLHWCLPGPIDSWNDILLQMLLN 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01215 421 Coils Coil 52 72 - -
Aip06g01215 421 Pfam PMR5 N terminal Domain 75 127 IPR025846 -
Aip06g01215 421 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 129 418 IPR026057 GO:0016740
Aip06g01215 421 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 62 419 - -
Aip06g01215 421 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 62 419 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01215 Aip-Chr6 17790578 17791943 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01215 - - pop:7492762 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01215 06 17790578 17791943 Aip02g00292 02 3847363 3852156 PCT