Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00896 ATGGTAAGCCTTGTGTTGTTTCTACTAATTGCTCTTTGTCCAGTTATTATGATCAAAGCATGGTCATTCAGTAAGCCACCATGTCCAAATTGCGGTGACCTTGCAGTTCCATATCCACTCAGCACCAACGATAATTGTGGCGACTCCAGATACAAAGTTTACTGCAACAATAACAAGTTAGAATTCTTGTCAGCCACAGGAAATTACTATAAGATCCTTAAAGTTGACCCTTGTAATAACAAGCTTGTTCTTCAACCACCCCTCATACTCAAAGAAACTTGTTATTCTTCTGATGTTGTTGATGGAGGGTTTCTCTTGGAACAAGACTTGCCCTTCAATATTTCTACACACAACACTGTCATGTTGTTGAATTGCTCTGAGAACATCCTTCTTTCCCCTCTCAACTGTTCCTCAAACAGTATATGTAGGGTGTTTGAGGATAAGGTTGAAGAGGGAAAAGGGTGTTTTGGTAAACTTTGCTGCCATTACTTGAAAGATTCAGCGATGAATTCTCATAAGATAAGAGTGAGGGTTGGAGGGTGCACAGCTTACACTTCCTTGGTTGATTGGAATCCTGATTCTCCTCCTGACTCTTGGAATTATGGGATTGAGCTTCAATGGTTGCCTGCACTTATTTGA 639 0.4053 MVSLVLFLLIALCPVIMIKAWSFSKPPCPNCGDLAVPYPLSTNDNCGDSRYKVYCNNNKLEFLSATGNYYKILKVDPCNNKLVLQPPLILKETCYSSDVVDGGFLLEQDLPFNISTHNTVMLLNCSENILLSPLNCSSNSICRVFEDKVEEGKGCFGKLCCHYLKDSAMNSHKIRVRVGGCTAYTSLVDWNPDSPPDSWNYGIELQWLPALI 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00896 212 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 15 210 - -
Aip06g00896 212 Pfam Wall-associated receptor kinase galacturonan-binding 28 83 IPR025287 GO:0030247
Aip06g00896 212 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 15 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00896 Aip-Chr6 12407989 12408960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00896 26 207 Receptor kinase-like Gene Family AT5G02070 39.894 2.18e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00896 - - cam:101515529 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00896 06 12407989 12408960 Aip06g00896 06 12407989 12408960 ECH