Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00880 ATGATGGCCCTCGTAGCGATAATAATGGGTCTCTTATTGTTTCAGTCGTCTTTTGCGGAAGAAGACGACGCCTTTGTGCTCACACAGGACACCTTCGAAAACGAGGTTGGCCATGATCGCGGCGTTCTCATCAAGTTCTACGCTCCCTGGTGTGGCCACTGTAAAAAGCTTGTACCGGAGTATGAAAAGCTCGCAGCAACTTTCAAGAAAACCAAGTCCGTTTTGATCGCCAAAGTAGATTGTGATGCAGATAAAAGCATTTGCTCTAAATATGGGGTTTCTGTTTACCCTACAATTAAGTGGTTTCCTCAGGGTTCTTTAGAACCTATGTTATATGAAGGTGCAAAAACCGCAGAAGCCCTTGTTGGATTTGTGAACATGAAAGGAGGTACCAATGTAAAGATAGCAACAACTCCATCTGATGTGGTGCCTCTCACCTTATTTAACTTTGATAAGATTGTCTTGGATAAAACAAAACATGTTCTTGTTGAGTTCTATGCACCCTGGTGCAAACATTGCAAGGCCTTTGCCCCTACTTATGAAAAGGTTGCTACAGCATTTAAACCAGAAGAAGATGTAGTTATAGCTAGTATTGATGGTGACATGTACAAGGATGTAACTACAAAATATGAAATTACTAGTTATCCCAAACTGAAATTGTTCAGAAAGAGCAATAAAGCTGGTGAAGTTTATGAAGGTGCTCGTAATTTGGATGATATTGTATCTTACATCAATGAGAAATGTGGCACAAATCGCGATGGACAAGGAAGACTTACTTCTAAAGCTGGTATAGTAGCATCCCTGGATAAGTTGGTGAAGAAATTTGTGAATGCAGGTGACAATGACAAAAAGGCCATCTATTCACAACTTGAAGAGGAAGTTGAGGATCTTGAAGGATCTGATGCAAGATATGGCAAATTGTACTTAAAACTTGCTAAGAACTGTATGGAAAAGGGTAAAGAGTATGCAAAGAACGAGGTTCAACGTCTTGAGAGAATGCTTGAAAAGTCAATAAACCCAACCAAGACAGATGAATTCACTCTCAAGAAGAACATCTTATCTTTATTTGCTTAA 1074 0.3966 MMALVAIIMGLLLFQSSFAEEDDAFVLTQDTFENEVGHDRGVLIKFYAPWCGHCKKLVPEYEKLAATFKKTKSVLIAKVDCDADKSICSKYGVSVYPTIKWFPQGSLEPMLYEGAKTAEALVGFVNMKGGTNVKIATTPSDVVPLTLFNFDKIVLDKTKHVLVEFYAPWCKHCKAFAPTYEKVATAFKPEEDVVIASIDGDMYKDVTTKYEITSYPKLKLFRKSNKAGEVYEGARNLDDIVSYINEKCGTNRDGQGRLTSKAGIVASLDKLVKKFVNAGDNDKKAIYSQLEEEVEDLEGSDARYGKLYLKLAKNCMEKGKEYAKNEVQRLERMLEKSINPTKTDEFTLKKNILSLFA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00880 357 Pfam Thioredoxin 142 245 IPR013766 -
Aip06g00880 357 Pfam Thioredoxin 25 125 IPR013766 -
Aip06g00880 357 SUPERFAMILY Thioredoxin-like 139 250 IPR036249 -
Aip06g00880 357 PANTHER PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED 12 356 - -
Aip06g00880 357 Gene3D - 262 357 IPR036356 -
Aip06g00880 357 PANTHER BNAC04G51940D PROTEIN 12 356 - -
Aip06g00880 357 ProSiteProfiles Thioredoxin domain profile. 16 130 IPR013766 -
Aip06g00880 357 Pfam Endoplasmic reticulum protein ERp29, C-terminal domain 263 356 IPR011679 GO:0005783
Aip06g00880 357 Gene3D Glutaredoxin 15 130 - -
Aip06g00880 357 ProSiteProfiles Thioredoxin domain profile. 132 249 IPR013766 -
Aip06g00880 357 TIGRFAM pdi_dom: protein disulfide-isomerase domain 27 127 IPR005788 GO:0003756
Aip06g00880 357 TIGRFAM pdi_dom: protein disulfide-isomerase domain 148 247 IPR005788 GO:0003756
Aip06g00880 357 PRINTS Thioredoxin family signature 42 50 - -
Aip06g00880 357 PRINTS Thioredoxin family signature 50 59 - -
Aip06g00880 357 PRINTS Thioredoxin family signature 92 103 - -
Aip06g00880 357 CDD PDI_a_ERp38 26 125 - -
Aip06g00880 357 Gene3D Glutaredoxin 134 261 - -
Aip06g00880 357 ProSitePatterns Thioredoxin family active site. 43 61 IPR017937 -
Aip06g00880 357 CDD ERp29c 265 356 IPR011679 GO:0005783
Aip06g00880 357 SUPERFAMILY ERP29 C domain-like 262 356 IPR036356 -
Aip06g00880 357 SUPERFAMILY Thioredoxin-like 18 126 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00880 Aip-Chr6 12175493 12177689 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00880 K09584 - gmx:100037472 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00880 06 12175493 12177689 Aip06g00880 06 12175493 12177689 ECH