Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00870 ATGTCAAGCACTGTGCTCAAGCAATCCAATACAAGAAAGTTTTTAAATTATAAAACCAGTAACCACACTCTCAAGATGCATAGAACGTTGGGCTCTTTGGGAGCTGAAGTTGCAGGGAAGATGAAAGCAATGTGGTTATGTCCAAAGGTTTCGGGTTTTGATCCTTCTGAAAGATGGGGTCACTCTGCTTGCTTCTTCAATGGCCTTATGTATGTCTTTGGGGGATGTTGTGGAGGGATGCATTTCAGTGATGTTCTCACTTTGGACCTTGATAAAATGGTTTGGAGGAAGGTCGCAACCACAGGCGAAAATCCAGGTCCTAGGGACAGCCATAGTGCTGTTATTGTAGGCCATAAGATGATAGTGTTTGGTGGCAGCAATGGATTCAAGAAGGTGAATCATATTCATATTCTTGATCTTGTCACCAAAGTGTGGGTTAGTCCTGAATGCAAAGGGACACCTCCTTCGCCCCGGGAGAGCCACACGGCCGTGCTCGTTGGCGGCTATAGACTAGTGATCTTTGGTGGCAGTGGGGAAGGCAGAGCAAACTATTTGAATGATTTGCACATTCTTGAACTAGGAACCATGAGATGGACTTGCCCTGAGTTGAAAGGTGAATTTCCTGTCCCTAGGGACAGTCATAGTACCATTGCCATTGGGAACAAGCTTATTGTATATGGTGGAGATTCAGGTTATCAGTACCATGGAAACATTGATATTCTTGATATGGAAACAATGACTTGGTCTAAATTGAGAATTCAAGGTTCTTCACCAGGAGTCAGGGCAGGTCATGCTGCAGTCTATATCATTGGAGGGGTTGGAGAAAAACGTTACTATAATGACATTTGGATCTTTGATATATGCACTTGTTCATGGACTCAACTCTATATAACTGGTCAAAGACCACAAGGGCGATTTTCTCATACTGCTGTTGTTATAGACATGGATATTGTCATCTATGGGGGGTGTGGTGAAGATGAAAATCCTCTCAATGAATTGTTAGTTTTGCAGCATGAAGCAGAGCCAAACCCACGTTACAACGCGAAAACTATGTTGATGGGGTCTAATGTGAAAGAAGGAGGAGCTTATGACTTTGATTCAGGTACTTCACAACAGAAGAGGAGGAGAGTTTCTACTACGAAGGTTTGGGATGTTGATTCTGAACAAGAAGAACACTCTCTCTCACTATCACAGCATTCATCACCATCTCAATCTGATCAAGAACAGACTCTTGGTCAAAGATCAAATGCTTCTGTCACCGATTCGCAGCAGCGTCTTCTGTTCAAACAGATGAATCAAACCCCAACCAATTGTCAATACAACAATGACTTGAGTAACAAGAAATCTATGAAGGATATCACTCAGGGAAATCCGCAAAATCTTCCTTCTCTAGTTCATCAGCCAAAGCAAGAACAGTGCCACCTGATTGGTGCTGAAGTTCGAGGTAAAATAGATGGAGCCTTTGACTCAGGTTTACTCATGACTGCATCCGTGAATGGAGAGATTTTCAGAGGGGTCTTATTTGCTCCGGCAGTAAAGGTGGTGGAAACAAATTGCTCTCTAACTACTCAAACTCAACCACCATTTGTGAACTCCAACTCAGATCATTCCCCACAAATCAAGCGAGGCGCTCGGTCGTCGATACTATTCAAGGAGCATAGAGCAAGTAAGAGTGATCTTGAAGGGTTGCTTTTGACACTTGGAGGACCTGCTAGCGCAAATAATCCTGAGGAGGTAGATTATTTAGGAAGCAAATAA 1758 0.4317 MSSTVLKQSNTRKFLNYKTSNHTLKMHRTLGSLGAEVAGKMKAMWLCPKVSGFDPSERWGHSACFFNGLMYVFGGCCGGMHFSDVLTLDLDKMVWRKVATTGENPGPRDSHSAVIVGHKMIVFGGSNGFKKVNHIHILDLVTKVWVSPECKGTPPSPRESHTAVLVGGYRLVIFGGSGEGRANYLNDLHILELGTMRWTCPELKGEFPVPRDSHSTIAIGNKLIVYGGDSGYQYHGNIDILDMETMTWSKLRIQGSSPGVRAGHAAVYIIGGVGEKRYYNDIWIFDICTCSWTQLYITGQRPQGRFSHTAVVIDMDIVIYGGCGEDENPLNELLVLQHEAEPNPRYNAKTMLMGSNVKEGGAYDFDSGTSQQKRRRVSTTKVWDVDSEQEEHSLSLSQHSSPSQSDQEQTLGQRSNASVTDSQQRLLFKQMNQTPTNCQYNNDLSNKKSMKDITQGNPQNLPSLVHQPKQEQCHLIGAEVRGKIDGAFDSGLLMTASVNGEIFRGVLFAPAVKVVETNCSLTTQTQPPFVNSNSDHSPQIKRGARSSILFKEHRASKSDLEGLLLTLGGPASANNPEEVDYLGSK 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00870 585 SUPERFAMILY Galactose oxidase, central domain 51 335 IPR011043 -
Aip06g00870 585 PANTHER OS01G0300900 PROTEIN 32 350 - -
Aip06g00870 585 Pfam Galactose oxidase, central domain 68 114 - -
Aip06g00870 585 Pfam Galactose oxidase, central domain 170 219 - -
Aip06g00870 585 Gene3D - 202 411 IPR015915 GO:0005515
Aip06g00870 585 MobiDBLite consensus disorder prediction 377 393 - -
Aip06g00870 585 Pfam Galactose oxidase, central domain 267 302 - -
Aip06g00870 585 Pfam Galactose oxidase, central domain 304 336 - -
Aip06g00870 585 PANTHER KELCH REPEAT DOMAIN 32 350 - -
Aip06g00870 585 PANTHER OS01G0300900 PROTEIN 362 471 - -
Aip06g00870 585 MobiDBLite consensus disorder prediction 362 461 - -
Aip06g00870 585 Gene3D - 45 201 IPR015915 GO:0005515
Aip06g00870 585 PANTHER KELCH REPEAT DOMAIN 362 471 - -
Aip06g00870 585 PANTHER KELCH REPEAT DOMAIN 470 532 - -
Aip06g00870 585 MobiDBLite consensus disorder prediction 394 461 - -
Aip06g00870 585 PANTHER OS01G0300900 PROTEIN 470 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00870 Aip-Chr6 11934246 11937449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00870 197 336 Acyl Lipid Metabolism Gene Families AT3G05420 26.752 1.94e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00870 K20285 - gmx:100801275 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00870 06 11934246 11937449 Aip06g00870 06 11934246 11937449 ECH