Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00865 ATGCTTCTGGAGGCAGCTGGAAGAACCAGCTCCCCGCACAGAAAGCGCCACAATAGTAATAGTACTAGTAGTAAGCCGCGAAACCAGAAATCCAAACGAGGAGATGATGGTGGAAGTGAGTCCAGAGGGGAAGACTCCGACGCCGAGGGCGGCGGAGCAAGCAAGAAGAAGCCGCCATCGTCATCAAGGAACGTTCCTCTCAAGAAGAGGTTGGACCTCACCAAAACTGAGAGGGAATTAGGCCATGAAGGAGAGTTGTTGGAGGATGATGATGATGATGATGATGATGAAGATGAAGAATCTGATGTTGGCAGTGATCTCTACAAGAATGAAGATGACAAGCAGAGGCTAGCAAACATGACTGAGCTCGAAAGAGAGATGATACTCTCCGATCGAGCTGCCAAAAAAGGCGAAAAGGAGTTCAAAGAACAATTAAGAATGAAGAGGGACACCAACAACAATGCTACTTCAAAGAACATGATCAATCATCAATCACCTCTTCCACCACCACCACCACCATCATCATCTTCCTCCAAGGTTCGTTCCTCCACCAGACACGCCGAGAGGACCGCCGCCAAAGGCGATGTCTTAAGCGAGTTGCGAGCCAAGAGGATGAAGCAGCAAGTGGTAGACACTCACCATGGAAAACCATCATCATCAAGCACCAATAAGGGGATTCCAATGAAGAAGAAAGCAGCAACTACTTCAAGTAGCTCAAGCCAGAGCGAGAGCGGTGACAGTGATAGAGATTCCTCTGAAGGGTTGGCTGATAGTGACGATGACGATGACAAGAACATGTTGAGAGAATCAAACATGCCAACGTTTGAAGAAATCAAGGAAATCACCATTAGGAGATCGAGGCTTGTGAAGTGGCTGAATGAACCATTCTTTGAAGAGTTAATTGTTGGGTGCTTTGTTAGAATTGGGATTGGAAAATCAGAGAGTGGAGCTGTTTACAGACTCTGCATGGTTCAGAGTGTTGATGGTGGCGATCCAAATAGGCACTACAAGGTTGAGAACAGAATCACTCACAAGTACCTTGTTTGTGTTTGGGGAAGTGAAAGCTCTGCCAAGAGGTTCCAAATGGCTGTGGTTTCGGATTCTTCGCCGTTGGAGAAAGAGTTCAGGCAATGGGTTAGGGAAATTGAGAGAAGTTGCAGCCACATGCCGAGTAAGGCGAGTGTTTTGGACAAGAGAGAGGCCATTAGAAGAACGAATAACTATGTCTACTCTGCAGCCACTGTGAAGCAGATGCTGGAGGAGAAGAAAGCCGCGCCTACTCGGCCGCTTAATGTCGCGGTTGAGAAGGACAAGCTGAAGAGGCTGATGGAGGTAGCAAAGAGCAAGAACGATGAGGCCGAGGTGCAGAGGATCTGCGCCAAGCTCCTGGAATTGGACGCGGCGCGCGAAGCCAGGGATAAGGACAGCAGGGCTAAAAGATTAGCTGAGATGAACAGAAAGAACAAGGTTGATAATTTCAAGAACTTGTCTGAGCATAGGAATTTGCAGGTGAATTTGAAATTGGGTGAGGCAGGGTATGATCCATTCTCTAGGAGGTGGACAAGGTCTAGGAATTACTACAATGCAGAAGGGAAAGAGATTAAACAAGAAGAGAGTCATCAAGTTAGTAATAATAGAGAGAAGCATGAAATTAAGGTTGAAGAACCAAGTGTGTCAGCAGGTAATGCTGTTGGGTTTAAAGCCACAGAAGCAGCACTGGAAGCTGCTGCAAGTGCAGGGAAATTGGTGGATACTTTGGCTCCGGTGGATTGCGGAACAGAATCAAACATGATGCATGATTTCGAGTTGCCTATTTCACTGGCTGAACTTAAGGATTTGGGCGGACCACAGGGATTGAAGAATGGGTTCTTGGCAAGGAAACAGAAGATAGAAGCAACGGTTGGGTTGCAGGTGCCTGAAAACGATGGAGGTAGGCATGCTCTCACATTAACTATCAGCGACTACAAGAGAAGAAGAGGGCTGTTGTAG 1989 0.4716 MLLEAAGRTSSPHRKRHNSNSTSSKPRNQKSKRGDDGGSESRGEDSDAEGGGASKKKPPSSSRNVPLKKRLDLTKTERELGHEGELLEDDDDDDDDEDEESDVGSDLYKNEDDKQRLANMTELEREMILSDRAAKKGEKEFKEQLRMKRDTNNNATSKNMINHQSPLPPPPPPSSSSSKVRSSTRHAERTAAKGDVLSELRAKRMKQQVVDTHHGKPSSSSTNKGIPMKKKAATTSSSSSQSESGDSDRDSSEGLADSDDDDDKNMLRESNMPTFEEIKEITIRRSRLVKWLNEPFFEELIVGCFVRIGIGKSESGAVYRLCMVQSVDGGDPNRHYKVENRITHKYLVCVWGSESSAKRFQMAVVSDSSPLEKEFRQWVREIERSCSHMPSKASVLDKREAIRRTNNYVYSAATVKQMLEEKKAAPTRPLNVAVEKDKLKRLMEVAKSKNDEAEVQRICAKLLELDAAREARDKDSRAKRLAEMNRKNKVDNFKNLSEHRNLQVNLKLGEAGYDPFSRRWTRSRNYYNAEGKEIKQEESHQVSNNREKHEIKVEEPSVSAGNAVGFKATEAALEAAASAGKLVDTLAPVDCGTESNMMHDFELPISLAELKDLGGPQGLKNGFLARKQKIEATVGLQVPENDGGRHALTLTISDYKRRRGLL 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00865 662 PANTHER PLUS-3 DOMAIN PROTEIN 1 662 - -
Aip06g00865 662 MobiDBLite consensus disorder prediction 182 211 - -
Aip06g00865 662 MobiDBLite consensus disorder prediction 531 550 - -
Aip06g00865 662 MobiDBLite consensus disorder prediction 1 271 - -
Aip06g00865 662 Pfam Plus-3 domain 277 382 IPR004343 GO:0003677
Aip06g00865 662 SMART rtf1 272 384 IPR004343 GO:0003677
Aip06g00865 662 MobiDBLite consensus disorder prediction 28 52 - -
Aip06g00865 662 ProSiteProfiles Plus3 domain profile. 272 407 IPR004343 GO:0003677
Aip06g00865 662 MobiDBLite consensus disorder prediction 68 83 - -
Aip06g00865 662 MobiDBLite consensus disorder prediction 84 106 - -
Aip06g00865 662 PANTHER UNCHARACTERIZED 1 662 - -
Aip06g00865 662 Coils Coil 436 456 - -
Aip06g00865 662 MobiDBLite consensus disorder prediction 107 149 - -
Aip06g00865 662 Gene3D - 271 405 IPR036128 GO:0003677
Aip06g00865 662 MobiDBLite consensus disorder prediction 212 245 - -
Aip06g00865 662 SUPERFAMILY Plus3-like 274 404 IPR036128 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00865 Aip-Chr6 11796112 11798100 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00865 K15178 - gmx:100793188 743.421