Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00860 ATGGATCTCAGCCAGCCTGCAGGTGAAAACTACGGCAATCCCATTACTTGCTTCTTTCACGTTTTCTTCAAGGGCGCAGCTTTGGCATTTTACATTGTATTTTCCATCTTTGTTGGTAACTTTGTCGTCATTTTCGTGGTCACTGCCCTTCTTGCTGCTCTTGATTTTTGGGTCGTCAAGAATGTAAGTGGCAGAATCTTAGTTGGTTTGAGGTGGTGGAATGAAATTGATGATCAGGGTGAGAGTGTTTGGAGATTTGAATGCCTCGATCAAGAGTCAATGGCTCGGTTGAACAAGAAAGATTCATGGCTTTTCTGGTGGACCCTTTACTTGAACGCAGGTATATGGCTTTTGTTGTCAATATTCTCGCTCATAAGGTTTGAAGCTGATTACATCCTAGTTGTAGGAGTTTGTTTGACTCTCAGTATTGCAAATATTGTTGGTTTCACCAAATGCAGAAAAGATGCTAAGAATCAAGTTCAACAATTTGCTGCTAGGACACTTGCCTCAAGGGTCTCATCTACCTTTCAGTCAGCATTTAGTATTGTCTGA 552 0.4149 MDLSQPAGENYGNPITCFFHVFFKGAALAFYIVFSIFVGNFVVIFVVTALLAALDFWVVKNVSGRILVGLRWWNEIDDQGESVWRFECLDQESMARLNKKDSWLFWWTLYLNAGIWLLLSIFSLIRFEADYILVVGVCLTLSIANIVGFTKCRKDAKNQVQQFAARTLASRVSSTFQSAFSIV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00860 183 PANTHER UNCHARACTERIZED 1 183 IPR008564 GO:0016021
Aip06g00860 183 Pfam Eukaryotic protein of unknown function (DUF846) 13 152 IPR008564 GO:0016021
Aip06g00860 183 PANTHER GOLGI APPARATUS MEMBRANE PROTEIN TVP23 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00860 Aip-Chr6 11773300 11775084 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00860 - - fve:101292241 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00860 06 11773300 11775084 Aip06g00860 06 11773300 11775084 ECH
Aip06g00860 06 11773300 11775084 Aip09g01510 09 28596420 28600528 PCT