Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00846 ATGGCTAGGAAGAAGATCAGAGAGTACCAATCCAAGAGGCTCCTCAAGGATCACCTAAGCCGACTCGCTTCCATTAACCTCGAAATTCAATCTGCTCAGGTGACTGAGTCCACGGACTTCACTGAGTTGACTAACCAACACCCATGGCTTTCCTCTACAAAATTGGTGGTCAAGCCTGACATGCTCTTCGGCAAGCGCGGTAAGAGTGGCCTCGTCGCTCTCAATTTGGACATTGCTCAAGTCGCCGATTTTGTCAAAGCACGCCTCGGCGTTGAGGTTGACATCGCTGGTTGCAAGGCACCTATCACCACTTTCATTGTTGAACCCTTTGTTCCACACGATCAAGAATTCTATCTCTCCATTGTTTCCGAACGCCTCGGCTCTGCCATCAGCTTCTCTGATTCTGGCGGCATCGAAATTGAGGAGAACTGGGATAAGGTTAAGACTATATTCCTTCCAACAGAGAAACCTATGACTCCGGAGGCCTGTGCGCCGCTGATTGCTACACTTCCTTTGGAGATTCGGGGCACAATTGGCAAATTCATAATCGGTGTGTTTGCTGTCTTTCAAGACTTGGACTTCAGTTTCCTAGAGATGAATCCATTTACACTGGTGAATGACAAGCCATATCCACTGGATATGAGAGGGGAATTGGATGACACTGCTGCATTCAAGAACTTCAACAAGTGGGGTAATATAGAGTTTCCATTGCCTTTTGGAAGAGTTCTGAGCCCCACAGAAAGCTTCATTCATTCCTTGGATGAGAAGACAAGTGCATCTTTGAAGTTTACTATATTGAACCCAAAAGGACGCATTTGGACAATGGTAGCTGGAGGCGGTGCAAGTGTTATATATGCCGATACTGTTGGAGATTTAGGTTACGCATCAGAGCTTGGAAACTATGCTGAGTATAGTGGAGCTCCAAATGAGGAGGAGGTGTTACAGTATGCAAGAGTTGTAATTGATTGTGCCACTGCTGAGCCCGATGGCCGTAAGAGAGCCCTTCTTATTGGAGGTGGCATTGCAAACTTCACTGATGTTGCCGCCACGTTTAGTGGGATTATTCGAGCCCTAAAAGAGAAGGAAACAAAGCTTAAAGCTGCAAGAATGCACATTTATGTCAGAAGAGGAGGTCCAAATTATCAGGCTGGTTTAGCGAAGATGCGTGCACTGGGGGAGGAACTGGGACTACCGATTCAGGTTTATGGACCAGAGGCTACAATGACTGGCATATTCGCTGTTATGATGAGTGAAAGTCGCAGCGGTGACTTGCCGTCTCAGTCTATTGGTAGCCATGGTTCCAACTCTTCTATGCGACGGAGGAGGAATATCAAGGACCAGACATGCTTTTGCGGGTTGAAGACAACGATCAAGAAATCTGGTACAAGAGAGAATCCAGATAGGTTGTTCCACACTTGTGCAAGACACCTGAAGGGAAGCCACTGCAACTTCTTTAGGTGGGTTGATGATGATGGGTATGCAGCAGAGACAGAAACTGATGCAGAGGCAACTTTAAGAGTTGAGAGGATAATCTGGTACCATCAGCTGAGGCCTTCGAGGATTGAGATCATGCTTTTGGATGGGATGGTAGcttgGTTCTATCTAGTTAAGCTTGGGGCTTTTGGATCATGGATACCTTCCTCTTCACTTCTGAAGCAAGATCCAGAAAGCAAGGTTGCCTGTGAGACCTGCACAAAGACCAACTTGGTCATGGTCTTTGGAGAGATTACCACCAAAGCCAATGTGGACTATGAGAAGATTGTTCGCGACACGTGCCGCGGTATAGGCTTTGTGTCCGATGATGTTGGCCTTGATGCAGACAATTGCAATGTATTGGTTTACCTGGAGCAGCAAAGCCCTGATATTGCACAGGGTGTCCATGGCAACCTCACAAAGCGGCCGGAGGAGATTGGTGCAGGTGATCAGGGTCACATGTTTGGCTATGCCACGGACGAGACACCAGAATTTATGCCTCTCAGTCATGTACTCGCTACCCAGCTCGGTGCTCGCCTCACCGAGGTGCGCAAGAATGGGACCTGCACTTGGTTGAGACCTGATGGGAAAACACAAGTTACTGTGGAATACTACAATGACAATGGCGCAATGGTCCCGGTCCGTGTCCACACTGTTCTGATTTCCACGCAGCATGATGAAACTGTTACCAATGATGAAATTGCTGCTGACCTCAAAGAGCATGTAATTAAGCATGTGATACCTGAGAAGTACTTGGATGAGAAGACCATTTTCCATCTCAACCCGTCTGGCCGGTTCGTGATTGGCGGCCCGCATGGTGATGCCGGCCTCACTGGGCGCAAAATCATTGTCGACACATATGGTGGTTGGGGAGCACATGGTGGCGGTGCCTTCTCTGGGAAGGACCCCACCAAGGTGGATAGGAGTGGAGCCTATATTGCTAGACAGGCTGCAAAGAGTATTGTGGCCAGTGGAATTGCAAGAAGGTGCATTGTGCAAATTTCATATGCAATTGGTGTTCCTGACCCATTATCTGTGTTTATTGACACTTATGGGACAGGGAAGGTTCCAGACAGGGAGATTCTGAAGATTGTGAAGGAGAACTTTGACTTTAGGCCTGGAATGATTTCCAATGATTTGGACCTCAAGAGGGGTGGGAATGGCAGGTTCTTGAAGACTGCTGCTTATGGACATTTTGGAAGAGATGACCCTGATTTCACATGGGAGATTGTGAAGCCTCTCCACTGGGAGAAGCCCCAAGAATAA 2739 0.4775 MARKKIREYQSKRLLKDHLSRLASINLEIQSAQVTESTDFTELTNQHPWLSSTKLVVKPDMLFGKRGKSGLVALNLDIAQVADFVKARLGVEVDIAGCKAPITTFIVEPFVPHDQEFYLSIVSERLGSAISFSDSGGIEIEENWDKVKTIFLPTEKPMTPEACAPLIATLPLEIRGTIGKFIIGVFAVFQDLDFSFLEMNPFTLVNDKPYPLDMRGELDDTAAFKNFNKWGNIEFPLPFGRVLSPTESFIHSLDEKTSASLKFTILNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATAEPDGRKRALLIGGGIANFTDVAATFSGIIRALKEKETKLKAARMHIYVRRGGPNYQAGLAKMRALGEELGLPIQVYGPEATMTGIFAVMMSESRSGDLPSQSIGSHGSNSSMRRRRNIKDQTCFCGLKTTIKKSGTRENPDRLFHTCARHLKGSHCNFFRWVDDDGYAAETETDAEATLRVERIIWYHQLRPSRIEIMLLDGMVAWFYLVKLGAFGSWIPSSSLLKQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRGIGFVSDDVGLDADNCNVLVYLEQQSPDIAQGVHGNLTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGARLTEVRKNGTCTWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKHVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGIARRCIVQISYAIGVPDPLSVFIDTYGTGKVPDREILKIVKENFDFRPGMISNDLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLHWEKPQE 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00846 912 Pfam GRF zinc finger 448 490 IPR010666 GO:0008270
Aip06g00846 912 Gene3D - 1 233 - -
Aip06g00846 912 TIGRFAM metK: methionine adenosyltransferase 550 904 IPR002133 GO:0004478|GO:0005524|GO:0006556
Aip06g00846 912 SUPERFAMILY S-adenosylmethionine synthetase 634 758 IPR022636 GO:0004478|GO:0006556
Aip06g00846 912 Gene3D - 636 900 - -
Aip06g00846 912 SUPERFAMILY Succinyl-CoA synthetase domains 257 403 IPR016102 -
Aip06g00846 912 CDD S-AdoMet_synt 550 900 - -
Aip06g00846 912 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
Aip06g00846 912 ProSitePatterns S-adenosylmethionine synthase signature 1. 638 648 IPR022631 GO:0004478|GO:0006556
Aip06g00846 912 ProSitePatterns S-adenosylmethionine synthase signature 2. 785 793 IPR022631 GO:0004478|GO:0006556
Aip06g00846 912 Pfam S-adenosylmethionine synthetase, central domain 636 757 IPR022629 GO:0004478|GO:0006556
Aip06g00846 912 Pfam S-adenosylmethionine synthetase, C-terminal domain 759 900 IPR022630 GO:0004478|GO:0006556
Aip06g00846 912 SUPERFAMILY S-adenosylmethionine synthetase 759 907 IPR022636 GO:0004478|GO:0006556
Aip06g00846 912 SUPERFAMILY S-adenosylmethionine synthetase 550 629 IPR022636 GO:0004478|GO:0006556
Aip06g00846 912 Gene3D - 240 423 IPR016102 -
Aip06g00846 912 Gene3D - 659 761 - -
Aip06g00846 912 Pfam ATP citrate lyase citrate-binding 241 414 IPR032263 -
Aip06g00846 912 Pfam ATP-grasp domain 6 203 IPR013650 -
Aip06g00846 912 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 3 1 413 - -
Aip06g00846 912 PANTHER ATP-CITRATE SYNTHASE 1 413 - -
Aip06g00846 912 Pfam S-adenosylmethionine synthetase, N-terminal domain 550 620 IPR022628 GO:0004478|GO:0006556
Aip06g00846 912 Gene3D - 550 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00846 Aip-Chr6 11477810 11486835 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00846 1 411 Acyl Lipid Metabolism Gene Families AT1G09430 87.105 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00846 K01648 - gmx:100787551 764.222