Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00813 ATGCTGCGGCTGAAAGCCTTCCGGCCTTCCACTGACAAAATCGTTAAGATCCAGTTGCATCCGACGCATCCATGGATGGTAACCGCCGATGATTCAGATCGAGTCTCCGTTTGGAATTGGGAACACCGTCAGGTGATATATGAGCTGAAAGCTGGTGGAGTGGATGAGCGACGTTTGGTCGGCGCAAAATTGGAGAAGCTTGCAGAGGGAGAGACAGAGTCTAAAGGGAAACCTACAGAAGCCATTCGAGGAGGAAGTGTTAAGCAGGTGAATTTTTATGATGACGATGTACGCTTTTGGCAACTTTGGCATAATCGATCGGCAGCTGCAGAGGCGCCTACAGCTGTCCATCATCTCAGTTCAGCTTTAAGTTCTCCTGCCCCAACTACAAAAGGAAGGCATTTTCTTGTCATATGTTGTTTAAACAAAGCTATTTTTTTGGACTTGGTGACAATGCGTGGTCGTGATGTACCGAAGCAAGAGCTTGATAACAAGTCACTTCTCTGCATGGAGTTCCTTTATAGATCTGGTGTTGGTGATGGTCCTCTTGTTGCTTTTGGTGCATCTGATGGTGTCATTAGAGTTCTCTCAATGATCACATGGAAGCTTGTGCGGAGGTACACTGGTGGTCATAAAGGATCAATCTCTTGCTTAATGTCCTTCATGGCTGCTTCTGGTGAGGCTCTTTTGGTCTCAGGAGCCAGTGATGGATTGCTCATAATTTGGAGTGCTGACCAAGGGCCAGATTCACGGGAACTTGTGCCCAAGCTGAGCTTAAAAGCACATGATGGTGGGGTTGTTGCTGTTGAGCTGTCTAGGGTGATGGGAGGTGCTCCTCAGCTAATTACAATTGGTGTGGATAAGACATTAGCTATATGGGACACAGTCTCCTTTAAGGAGCTGCGGCGCATAAAGCCAGTCCCAAAGTTGGCTTGCCACAGCGTGGCTTCATGGTGTCATCCCCGAGCTCCAAACCTTGATATTCTAACCTGTGCTAAAGATTCTCACATATGGGCAATTGAACATCCCACTTATTCTGCTCTCACAAGGCCATTGTGCGAATTGTCCACAGTTATTCCTCCACAAGTTCTTGCTCCTAATAAGAAACTGAGGGTGTATTGTATGGTTGCACACACCTTGCAGCCACATCTTGTTGCTACTGGAACCAATATTGGTGTTATTATCTGCGAGTTTGACCCTAGATCTCTTCCACCTGTAGCTCCGCTACCAACCCCATCAGACAGCAGAGAACATTCTGCTGTATTTGTAGTTGAAAGGGAACTAAAGCTATTAAATTTCCAGTTAAACAACTCAGCAAATCCATCTCTTGGAAATAATAGCTCCTTGTCAGAAACTGGAAGATCAAAGGGAGATTTTTTTGAACCATTGCCTGTCAAGCAGGGGAAGAAGCACATTAGTACACCTGTTCCACATGATTCATACTCTGTGCTTTCTGTGAGCAGTTCAGGGAATGATTGGTCAATTGTTGACTCTGGAACTGCAAGGCTTCTTGCTTGGGATACATGCCGTGACAGATTTGCTATATTGGAATCAGCAATTCCCCCAAGACTTCCTGTTCTTCCCAAGGGTAGTTCATCAAAAAGAGCAAGAGAGGCAGCTGCAGCACAAGCAGCAGCTGCTGCTGCCGCAGCAGCTTCCTCAGCTTCTGTTCAAGTCCGCATCTTATTAGATGATGGAACATCAAATATACTAATGAGATCTGTTGGTACACGCAGTGAACCGGTGATTGGTTTGCATGGAGGGGCACTGCTTGGAGTTGCCTATCGGTCATCTAGGAGAGTCAGTCCTATTGCCGCCACAGCTATTTCAACAATCCAGTCTATGCCTTTATCTGGTTATGGAAGTAGTGGTGTTTCTTCATTTTCTACTTATGATGATGGATTTTCTTCATACAGATCTCCAGCTGAGGCAGCACCTCAAAACTTCCAGCTATACAGTTGGGAGACATTCCAGCCTGTGGGCGGTTTACTTCCCCAGCCAGAATGGACTGCTTGGGACCAAACTGTTGAATACTGTGCATTTGCATATCAGCAATACATAGTCATCTCTTGTTTGCGCCCTCAATATAGATACCTGGGAGATGTTGCAATCCCATATGCTACTGGTGGCGTTTGGCACCGCAGACAATTGTTTGTGGCTACACCAACTACTATAGAAGTTGTGTTTGTAGATGCTGGGGTTGCACAAATTGACATTGAAACAAAGAAGATGAAGGAAGAGCAGAAAATGAAAGAAGCACAGGCAAGAGCAGTAGCTGAGCATGGAGAGTTAGCACTAATTACAGTAGATGGTCCCCAAGCTACTACAGAAGAAAGAATATCATTGAGGCCACCAATGTTGCAGGTAGTACGATTGGCTTCATTTCAGCATGCTCCTTCAGTGCCACCTTTCTTATCATTGCCAAAACAATCTAGAGTTGACACCGATGACTCTTGGATGGGAAGGGAAGCAGAAGAGAGAAAGGCTAGTGAGGTGGCTGTTGGTGGTGGGGGTGTCTCTGTGGCAGTAACTCGTTTTCCGATGGAGCAGAAACGCCCGATTGGACCTCTTGTTGTGGTAGGCGTCAGAGATGGAGTTCTTTGGCTAATTGACAGGTACATGTTCGCTCATGCCTTATCCTTGAGTCATCCTGGTATTCGTTGCCGATGTCTTGCTGCTTATGGCGATGCTGTTAGTGCAGTAAAGTGGGCAAGTAGGCTTGGGAGAGAACATCATGATGATTTAGCACAATTTTTGCTAGGAATGGGCTATGCCAATGAAGCACTTCATTTACCTGGAATATCCAAGAGGTTGGAGTTCGATTTGGCAATGAAGAGCAATGATTTGAAGAGAGCTCTCCAGTGTCTTCTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTACTGGTCTTGGTTTGAATGACATTCTTAATTTATCTGACAAGAAACAAGATGTCGTTGAAGGTGTTCAGGGTATAGTGAAATTTGCAAGAGAGTTCTTGGATCTTATTGATGCTGCAGATGCTACTGCACAGGGTGAAATTGCTCGTGAAGCTCTCAAGAGGCTAGCTGCAGCTGCTTCAGTGAAAGGTGCTTTACAAGGTCATGAGTTGAGAGGAATGGCATTACGCCTTGCAAATCATGGGGAATTGACTCGGCTAAGTGGTTTGGTAAACAACTTAATCACACTTGGGTTGGGACGGGAAGCTGCATTTGCTGCTGCTGTTTTGGGAGACAATGCTCTAATGGAGAAAGCATGGCAGGATACTGGCATGCTGGCTGAGGCCGTGCTACATGCTCATGCACACGGACGTCCAACGTTGAAGAACTTGGTTCAGGCCTGGAACCAAATGCTACAAAGAGAGGTTGAGCCTACCCCGTCACAGAAGACAGATGCTACAGCTGCATTTTTAGCTTCTCTTGAGGAGCCTAAGCTTACAAGTTTGAAGGAAGCAGGGAAGAAACCACCCATCGAAATCCTACCTCCAGGGATGATGTCTCTTGATGCTCCTATATCAATCCAGAAAAAACCAGCTGCTGCTGCTGCCCAGAATTCATTAACACCACCGGGAAAGCCATTGGCACTTGAAGCACCTCCCACAACCACAGCAACGCCAGAGGGTGCTACGCAGCAGCCTGATTCCACACAGCAGCCTGATTCCACACAGCAATCTGAATCCACACAGCAATCTGAGTCGACACCTCCTGCCCCAGTTAGTGATCAACCTCCATCAGAATCTACATCAGAATCCACGCCAGCTCCAGAGGCCGCTCCACCTGAGCCAGAGTCAGGTGAAACCAAGGTCGATAATGTAGCTCCTACCGCTGCGCCAGTCTCTGCCACAAATGCAACTGCTAGTGGGGAAACTGCTCAAGCCACACCTCCGAGCAATCCAGCACCACCAGAGGCACCATCACCGGTAGCAGAGGTGCCATCACCACTAGCAGAGGCTCCTGAGACAAATGTTTCTATTACAGGACCTGTGAATGATCCATTCTTGTGA 4011 0.4652 MLRLKAFRPSTDKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVIYELKAGGVDERRLVGAKLEKLAEGETESKGKPTEAIRGGSVKQVNFYDDDVRFWQLWHNRSAAAEAPTAVHHLSSALSSPAPTTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRSGVGDGPLVAFGASDGVIRVLSMITWKLVRRYTGGHKGSISCLMSFMAASGEALLVSGASDGLLIIWSADQGPDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGVDKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCAKDSHIWAIEHPTYSALTRPLCELSTVIPPQVLAPNKKLRVYCMVAHTLQPHLVATGTNIGVIICEFDPRSLPPVAPLPTPSDSREHSAVFVVERELKLLNFQLNNSANPSLGNNSSLSETGRSKGDFFEPLPVKQGKKHISTPVPHDSYSVLSVSSSGNDWSIVDSGTARLLAWDTCRDRFAILESAIPPRLPVLPKGSSSKRAREAAAAQAAAAAAAAASSASVQVRILLDDGTSNILMRSVGTRSEPVIGLHGGALLGVAYRSSRRVSPIAATAISTIQSMPLSGYGSSGVSSFSTYDDGFSSYRSPAEAAPQNFQLYSWETFQPVGGLLPQPEWTAWDQTVEYCAFAYQQYIVISCLRPQYRYLGDVAIPYATGGVWHRRQLFVATPTTIEVVFVDAGVAQIDIETKKMKEEQKMKEAQARAVAEHGELALITVDGPQATTEERISLRPPMLQVVRLASFQHAPSVPPFLSLPKQSRVDTDDSWMGREAEERKASEVAVGGGGVSVAVTRFPMEQKRPIGPLVVVGVRDGVLWLIDRYMFAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFLLGMGYANEALHLPGISKRLEFDLAMKSNDLKRALQCLLXXXXXXXXXXXXTTGLGLNDILNLSDKKQDVVEGVQGIVKFAREFLDLIDAADATAQGEIAREALKRLAAAASVKGALQGHELRGMALRLANHGELTRLSGLVNNLITLGLGREAAFAAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNQMLQREVEPTPSQKTDATAAFLASLEEPKLTSLKEAGKKPPIEILPPGMMSLDAPISIQKKPAAAAAQNSLTPPGKPLALEAPPTTTATPEGATQQPDSTQQPDSTQQSESTQQSESTPPAPVSDQPPSESTSESTPAPEAAPPEPESGETKVDNVAPTAAPVSATNATASGETAQATPPSNPAPPEAPSPVAEVPSPLAEAPETNVSITGPVNDPFL 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00813 1336 MobiDBLite consensus disorder prediction 1150 1336 - -
Aip06g00813 1336 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 303 IPR001680 GO:0005515
Aip06g00813 1336 Gene3D - 889 1138 - -
Aip06g00813 1336 MobiDBLite consensus disorder prediction 1205 1238 - -
Aip06g00813 1336 Coils Coil 736 756 - -
Aip06g00813 1336 MobiDBLite consensus disorder prediction 1297 1311 - -
Aip06g00813 1336 Gene3D - 3 427 IPR015943 GO:0005515
Aip06g00813 1336 MobiDBLite consensus disorder prediction 442 464 - -
Aip06g00813 1336 SUPERFAMILY WD40 repeat-like 7 413 IPR036322 GO:0005515
Aip06g00813 1336 PANTHER TSET COMPLEX MEMBER TSTF 1 1166 - -
Aip06g00813 1336 MobiDBLite consensus disorder prediction 1278 1296 - -
Aip06g00813 1336 PANTHER TSET COMPLEX MEMBER TSTF 1 1166 - -
Aip06g00813 1336 SMART WD40_4 1 39 IPR001680 GO:0005515
Aip06g00813 1336 SMART WD40_4 252 294 IPR001680 GO:0005515
Aip06g00813 1336 SMART WD40_4 200 243 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00813 Aip-Chr6 11000034 11011669 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00813 - - gmx:100777567 2133.99