Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00808 ATGGTTTTGACAGCTTTTATGGTGGCCGTGGTTGTTGTCCAACTCCAACATGTGAGTTGCAACGGTGTTGGTGATGGTACCAGTGGTGTTGGATTTGTTCAACGAAGTGGCACCAACTTTGTTGTGAATGGGAAACGTTTTTACTTCAATGGATTCAATGCTTACTGGCTCATGTACATGGGAACTGACCCATCTACAAGGTCCAAGGTCACAACCACTTTACAACAAGCCTCCATTCATGGCTTAAGGGTTGCAAGAACTTGGGCCTTCAATGATGGACCTAATTACAGAGCCCTCCAGATTTCTCCTGGCACCTATGACGAGAATGTGTTTAGAGGATTGGATTTTGTAGTTTCTGAAGCGCGAAAATATGGGGTGCGGTTGATACTGAGCTTTGTGAACAATTGGAAAGATTTTGGTGGGAAAAATCAGTATGTGCAATGGGCAAGAGAGCATGGTGGCCAAAATGTTAACAATGAAGATGACTTCTTTAGTAACCCAGTTGCTAAGCAATACTACAAGAACCATATTAAGGTTACATTCATATTCATATATTATATACTTGAGAGCATGCATGCAAGGGTGGCATATAAGGATGATCCAACCATTTTTGCGTGGGAATTGATGAACGAACCTCGTTCCCAAAGTGACTACTCAGGCAAAGTTATCAAGGAATGGGTGATTGAGATGGCTGCTTATGTGAAATCCATTGATAGAAATCATTTACTTGAAGTTGGACTTGAAGGCTTCTATGATGAAACCAGAAAACAATTCAATCCAGGATATCAATTAGTTGGCACTGATTTCATTTCTAGCAACCAAGTTCCCCAAGTCGATTTTGCTACCATCCATCTCTATCCCGATGAATGGATGGCAGGGTCGAACGAAGTAGCAAAGGGTGAATTTGTAGACAAATGGATAAAAGCACACATTGAAGACACACAGAAGATTTTGGGAAAGCCCATTGTTGTTGGAGAGTTTGGCAAGTCTTCAAAGACACCAGGGTATAGCGTTGAAGAAAGGGACAATTACATGAGAAAGATCTATGATGCAATATTCACTAGTGCTAGTAGTGGGGGACCTTGTGCTGGTGGGCTTTTTTGGCAGCTCATGGCCCAACAAATGGATGGCTTCCGAGATGGCAATGAAATTATCTTCCAAGAGTCCCCTTCTACTACCAAAATTATCGACCAACAATCTTACAGAATGTCATCTATCTCTTAG 1224 0.4183 MVLTAFMVAVVVVQLQHVSCNGVGDGTSGVGFVQRSGTNFVVNGKRFYFNGFNAYWLMYMGTDPSTRSKVTTTLQQASIHGLRVARTWAFNDGPNYRALQISPGTYDENVFRGLDFVVSEARKYGVRLILSFVNNWKDFGGKNQYVQWAREHGGQNVNNEDDFFSNPVAKQYYKNHIKVTFIFIYYILESMHARVAYKDDPTIFAWELMNEPRSQSDYSGKVIKEWVIEMAAYVKSIDRNHLLEVGLEGFYDETRKQFNPGYQLVGTDFISSNQVPQVDFATIHLYPDEWMAGSNEVAKGEFVDKWIKAHIEDTQKILGKPIVVGEFGKSSKTPGYSVEERDNYMRKIYDAIFTSASSGGPCAGGLFWQLMAQQMDGFRDGNEIIFQESPSTTKIIDQQSYRMSSIS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00808 407 PANTHER - 6 406 IPR045053 GO:0004553
Aip06g00808 407 Pfam Cellulase (glycosyl hydrolase family 5) 43 344 IPR001547 GO:0004553|GO:0071704
Aip06g00808 407 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 6 406 - -
Aip06g00808 407 Gene3D Glycosidases 30 407 - -
Aip06g00808 407 SUPERFAMILY (Trans)glycosidases 32 396 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00808 Aip-Chr6 10914556 10918086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00808 2 406 Glycoside Hydrolase AT5G66460 52.078 2.22e-147 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00808 K19355 - gmx:100787923 583.948