Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00768 ATGTTATACACCGTTGGCAAGAGGCTGATTAAAGATGAAGAGGGTGGGCTTAACGTAGCCCATTACCCAAAAATTAATCAGATTTCCATTAACAAAAGTGCGGCGGATTGGCAGTCGGGCAGAGCATCTAACGACCTAACCGCGAAATTGGCAGCCCGTGATCTCTTCTTCTCAATACTCTCATTATTTACGCACTTCCAATTAACTCCGCCATTCTCACACCCAATATTCCACCCTCGAATTCCATCTTTACTACGTTTTTACTCTGCCGAAGTGCAACCTCAACTATCTACGGAGCTCTTGAGCATAATGGAACAGAGACTATCTGCTATTGAGTACAGGTCTGCCACTCTCAACAATCTTCTCAATCAGCCCGAAATACCACCATCAGAATACGCAAGAGCAAATAAGGAGCTTCGTAAACTGAGCAGTTCGTTACACCTTATTAACGAGTTGAGGGCTAAACAGAAGGAAATTGATGGCTTGAAGTCACTGGTGGCTGAATGTTCCGATGACAAAGACATGCTTAACATGGCGACAGAGGAAATGGGACAAGCCATAGAGGAAGAACGAAGACTGCAACATTTGCTGTTGAAGTCCTTACTTCCTAAGGATGATGCTGATGAAAGGGACTGCATTTTGGAGGTCAGAGCAGGCACTGGTGGGGAGGAGGCTTCTTTGTTTGCAATGGACATTTTCAAAATGTACGAAAAGTATGCTCACAAGAATGGCTGGAAATTTGTAGTAGTAGATATTGCTCAATCAGATTTTAAAGGATACAAGGAAGCTAGTGCAGCAATTGCAGGAGATGGTGCTTTTGGGAAACTAAAATTTGAAAGTGGAATACATAGAGTACAGAGAGTTCCGGTGACAGAAAAATTAGGTCGAGTTCATACCAGTGCTGTTTCTGTCGCAATCCTCCCCCAGGCTGACGAGGTTGATGTTCAATTGAAGAATGAAGACTTAAAAATTGATACCTACAGATCTGGTGGTTCGGGTGGTCAGCATGCAAATACAACAAACAGTGCTGTTAGAATAACTCACATTCCGACTGGGATTACAGTTGCTATACAAGATGAGCGTTCTCAACATCAAAACAAGGCCAAAGCACTTAAAGTACTGTGTGCAAAGCTATTTGAAATGGAAAGGGTCCGAGCTCATAGTACACGATCAAAACTTCGGTCAGAACAGATTGGCAGCGGTGATAGATCTGAACGCATCCGGACATACAACTTTCCTCAAGGTCGTGTCACCGATCATAGAGTTGGTATAACTTATCACTCAATAGATGATGTGATGCAAGGTGAGAATCTTGAGGTATTTATTGATGCTCTTTTATTGCAAGAAGAAATGGATGCAATTGCAACTTTTAGTTCTTCTCAGTAA 1386 0.4257 MLYTVGKRLIKDEEGGLNVAHYPKINQISINKSAADWQSGRASNDLTAKLAARDLFFSILSLFTHFQLTPPFSHPIFHPRIPSLLRFYSAEVQPQLSTELLSIMEQRLSAIEYRSATLNNLLNQPEIPPSEYARANKELRKLSSSLHLINELRAKQKEIDGLKSLVAECSDDKDMLNMATEEMGQAIEEERRLQHLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAMDIFKMYEKYAHKNGWKFVVVDIAQSDFKGYKEASAAIAGDGAFGKLKFESGIHRVQRVPVTEKLGRVHTSAVSVAILPQADEVDVQLKNEDLKIDTYRSGGSGGQHANTTNSAVRITHIPTGITVAIQDERSQHQNKAKALKVLCAKLFEMERVRAHSTRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSIDDVMQGENLEVFIDALLLQEEMDAIATFSSSQ 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00768 461 Gene3D - 208 461 - -
Aip06g00768 461 Gene3D - 97 206 - -
Aip06g00768 461 SUPERFAMILY Release factor 115 449 IPR045853 -
Aip06g00768 461 Hamap Peptide chain release factor 1 [prfA]. 104 458 IPR004373 GO:0006415|GO:0016149
Aip06g00768 461 Pfam PCRF domain 114 304 IPR005139 GO:0006415
Aip06g00768 461 Pfam RF-1 domain 311 421 IPR000352 GO:0003747|GO:0006415
Aip06g00768 461 SMART PCRF_a_2 164 279 IPR005139 GO:0006415
Aip06g00768 461 PANTHER LD18447P 87 459 - -
Aip06g00768 461 Gene3D - 312 401 - -
Aip06g00768 461 TIGRFAM prfA: peptide chain release factor 1 105 458 IPR004373 GO:0006415|GO:0016149
Aip06g00768 461 PANTHER LD18447P 87 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00768 Aip-Chr6 10247067 10249872 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00768 K02835 - gmx:100800412 641.343