Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00757 ATGGTGGAAGAGGAGCATCAGAACTTGAGCAAATGGCGCTTGGAGCGTGGCCCTTACCTCGGAGACATTTCGGCTCTGTGTTTACTTCGCATCCCCAATCACTCTCTTCCTCTTCTTCTAGCTGGTTTAGGATCTGAGATTCTTCTCTACGACTTAGAACTCGCAAAGATTCTGAGATCCTTCTCTGTCTTCCAAGGCATCCGCGTCCATGGCATCGCCACCTCTCAAGACACTCTTCCCTCTGTAGTTGCCGTGTTTGGCGAAACGAGGCTCAAGCTTTTCAGCTTCTCATACGACGCCGTTTCTGAGTCCCCGCAGCTGAACCTGATTCAGTTGTTGCCCAAGTTTCCTCACTGGGTTTTGGATGTTTGCTTTCTCACGGGTTGTTTAGCTCATTCCAATGTGGGAAGCCATTTTCTTGCTGTAGGATCTAGCGACAATTCAGTTCACGTTTGGGACATCTCCAACTCTTGTACGGTTCTCAAGGTTCAATCTTCAGTGCGGTGCCTTTTGTACTCGATGCGACTATGGGGTCACAATCTTCAAGCTCTCCGTGTTGCATCTGGCACAATATTTAATGAGATTATTGTTTGGAAAGTGGCCCCTCAGCTTGATAAGTGTTCATCAAGCTTCAGAGAAGACAATGATCGTCAGAGCATTTCATTATGCAATTGCTGTATGTTCAAAGATCAACTTTATGGGGCTGTTCATGTATGTAAACTTATTGGACATGAAGGTTCAATCTTCCGAATAGCATGGTCGTCTTGTGGCTCTAAACTGGTATCTGTCTCTGATGACCGTAGTGCACGTGTCTGGGCTGTTCCTATTGAAGTGGAAGATTTTACGCGGCATGATCCCACTGCCCTTGTCTTATTCGGACATAATGCTCGAGTTTGGGATTGTTGTATTGCTGATCACTTGATTGTCACTGCCAGTGAGGATTGTACGTGTCGTCTATGGGGAGTTGATGGTGAACAACTGCAAGTCATTAAGGAGCACATAGGGAGGGGTATATGGAGATGTATGTATGACCCAAATTCGGCACTTCTCATAACTGCTGGGTTTGACTCAGCTATCAGAGTGCATCAGCCTCATGCTTCTGTATCCAGGGGCTTGGCAGCAGCACCAGGCCCTCCTGACAGGGCAGAGACATTTTCCATTTGCATCCCTAATGTGTTGGATCGTATTGGACTCATGGACAGCAAGAGTGAATATGTACGTTGTTTACATCTTGCCTCTCAGGACAGTCTTTATGTTGCCACAAATCATGGTTTTCTTTACCATGCTAAATTCATTGGTGCAAGAGGTGCTCAGTGGAAGCAACTTGTTCAGGTCAGCAATGGGGCTCAAATTATCTGTATGGATTTATTGTCTAAGGACTCAATTGAACTTGACTGCGGTGCTGACAATTGGGTTGCTATTGGAGATGGTAAAGGAAATATGACAGTTATTGGAGTTACTGATAATGGTTGTACTCCTACAGTGAGACTAAACTTCACCTGGTCAGCTGACATGGAGAGACGGCTCTTGGGTACCTATTGGTGCAAATCTCTGGGATGCAGGTATGTCTTCACAGCTGATCCTAGAGGAACATTGAAACTATGGAGGTTGCCTGATCCCCCACAATCTAGCCTCACAGGCTCCATGAAGAGTAATAGTGCGTCACATATAGCAGATTTCATATCAAATTTTGGAATGCGGATAATGTGTTTGGATGCTTGCGTGGAAGAAGAGATCCTAGTGTGTGGAGATGTACGTGGTAATATGGTTGTGTTCCCCTTGCCAAAGAATCTGGTGCTTGGCACAGCATTAGTACAAGAAGGGAAGATAACTCCGGTAAATCATTTCAAAGGGATTCATGGTATATCAAGTGTGTCTAGTGTTTCTGTGACTAAGCTTGGTCACAATCAGCTTGAGATAAGCTCAACCGGAGCAGACGGATGTATATGCTATCTAGAATATGATAGAGATATGCGTACTTTGCAATTCATGGGGTTGAAACAGGTGAAAGAGTTGAGTTTGATTGAAAATGTTTCTGTGAATAACAACTCTGTTGGTACATTATCTGGCGGTTATGCAGCTGGTTTTGCATCAGTTGATTTCATAGTGTGGAACTTAGTTAACGAGAGTAAGGTGGTGAAAATTCCATGCGGTGGATGGCGCCGTCCTCACTCCTACTATCTAGGTGATATACCGGAGAAGGAAAATTGCTTTGCCTTTGTCAAGGATGAAATGATACATATCCATAGACACTGGACTCATGATAAAGATGAGAAGATATATCCTCAGAGGTTACATTTGCAATTTCATGGGAGAGAGATACATTCCTTGTGCTTTATCTCTGAAGATATACTCCCTGGAGATTCTTATAAGCATACCTTATTTTCTAAATTAAGTTGGATTGCAACTGGATGTGAAGATGGAACTGTGAGATTGACTTTGTACTCTCCAGATATTGAAAATTGGTCCATGTCAAAACTGCTTGGTGAACATGTCGGAGGATCAGCTGTAAGATCAATTAGTTGTGTGTCAAAACTGCATACCTTTTCACCAAGTACTACTGATGTACCTGGTGGAAATGGTGAACTGAATGCTGCTGAGAGTGAAGATAATCTAACCTTACTCATATCTGTGGGTGCAAAGCGTGTGGTAACTTCTTGGCTACTGAAATATCAGAAGCAGAGTGACAAAAATGACCTTTTAATTGATCATCAGTATAATTCAAAAGGAGTTGATGATCAATTTTTGTCAAGCTTGCCCTCATCAATGACATTTCAGTGGCTTTCTACTGATATGCCAGCAAGATATTCGATTACCCAGAAATATCCAGAAAATGCTCTCAAGAATGTAGTAAGTGCTGCTGAACAAGTTTCTAATACAGAGGTTGATGGTAGACCTGGATCTCTGTTGGATGAAAGGGGAATGATGAACTCAATCAAAGATAAACATGAGGATGACTGGAGATATCTTGCTGTTACTGCTTTTCTTGTTAAATGTGTGGGTTCCAGGACATCTGTTTGTTTTGTTGTTGTTGCCTGTTCAGATGCTACACTTGTGTTACGGGCTTTAGTTTTGCCCTTCCGCCTATGGTTTGATGTTGCTTTGTTAGTTCCTTTACTATCCCCAGTTTTGTCATTGCAGCATATCATTTTCCCCATATCTAGGCCTTTTAAAGAAAACACTCAATTTGGAAATGCTTATATTGCAATCAGTGGATCTACTGATGGGAGTATTGCTTTTTGGGACCTGACTGATAGCGTTGAAGCTTTTATGCAGAGGATTTCTGTTTGTAATGTAGAGAATTTCTTTGATGGTCAGAAACGCCCACAATCAGGGAGAGGAAGTCAGGGTGGTAGATGGTGGAGATCATTGAGCAGTGGTTTGTCAAAGAAAAGGCAGCACAGTGATCAGGTAACCTCAAAAGCCAAAGATGAAACCAAGAGCATCTGTCATGCTGACACTGTTAGTGGTGACTCTTCAATAACAAATGGATCTGAAGACAGCAAAATGGGTTGTTCCCAAACCACGCAAACAGCTTCCCCTAAGTCGGAGATTAAAACTGATAATTCCGTGGCGGAAATATGTGAAATACAGCCTCTACGCCTTTTGCAAAATATTCACCAATCTGGAGTCAATTGTCTCCATGTTTCAGAGATAAAAGGTGGCCAAAACAACAATAGTTGCAATGTATATAGTATAGTTAGTGGTGGTGATGATCAGGCACTTCATCATCTTACCGTTGAACTATCACTTAAGTCAACAAATTCAGATAATGGGGTTGTGACTACAGAAATAAGACATTGGACCTCTGGACCTGAATATGAGGACATAACTTTTCAAAGTTGGAGCAAGAATTATGGAATCAGGTTCTTAAATTATGTGAAAATTCCTTCGGCCCACAGCTCTTCAGTCAAAGGTGTGTGGACGGATGGGTCTTGGGTGTTTTCAACCGGACTTGATCAGCGAGTCAGATGCTGGCGACTTCATGACAGTAAGCTCGTCGAGCATGCACATCTAATAGTTAGTGTACCAGAGCCAGAAGCATTATCTGCTAGAGCCTGTGTCAGGAACCATTATCAGATTGCTGTTGCTGGCAGAGGGATGCAAATAGTTGACTTTTCAGTATCATAA 4131 0.4273 MVEEEHQNLSKWRLERGPYLGDISALCLLRIPNHSLPLLLAGLGSEILLYDLELAKILRSFSVFQGIRVHGIATSQDTLPSVVAVFGETRLKLFSFSYDAVSESPQLNLIQLLPKFPHWVLDVCFLTGCLAHSNVGSHFLAVGSSDNSVHVWDISNSCTVLKVQSSVRCLLYSMRLWGHNLQALRVASGTIFNEIIVWKVAPQLDKCSSSFREDNDRQSISLCNCCMFKDQLYGAVHVCKLIGHEGSIFRIAWSSCGSKLVSVSDDRSARVWAVPIEVEDFTRHDPTALVLFGHNARVWDCCIADHLIVTASEDCTCRLWGVDGEQLQVIKEHIGRGIWRCMYDPNSALLITAGFDSAIRVHQPHASVSRGLAAAPGPPDRAETFSICIPNVLDRIGLMDSKSEYVRCLHLASQDSLYVATNHGFLYHAKFIGARGAQWKQLVQVSNGAQIICMDLLSKDSIELDCGADNWVAIGDGKGNMTVIGVTDNGCTPTVRLNFTWSADMERRLLGTYWCKSLGCRYVFTADPRGTLKLWRLPDPPQSSLTGSMKSNSASHIADFISNFGMRIMCLDACVEEEILVCGDVRGNMVVFPLPKNLVLGTALVQEGKITPVNHFKGIHGISSVSSVSVTKLGHNQLEISSTGADGCICYLEYDRDMRTLQFMGLKQVKELSLIENVSVNNNSVGTLSGGYAAGFASVDFIVWNLVNESKVVKIPCGGWRRPHSYYLGDIPEKENCFAFVKDEMIHIHRHWTHDKDEKIYPQRLHLQFHGREIHSLCFISEDILPGDSYKHTLFSKLSWIATGCEDGTVRLTLYSPDIENWSMSKLLGEHVGGSAVRSISCVSKLHTFSPSTTDVPGGNGELNAAESEDNLTLLISVGAKRVVTSWLLKYQKQSDKNDLLIDHQYNSKGVDDQFLSSLPSSMTFQWLSTDMPARYSITQKYPENALKNVVSAAEQVSNTEVDGRPGSLLDERGMMNSIKDKHEDDWRYLAVTAFLVKCVGSRTSVCFVVVACSDATLVLRALVLPFRLWFDVALLVPLLSPVLSLQHIIFPISRPFKENTQFGNAYIAISGSTDGSIAFWDLTDSVEAFMQRISVCNVENFFDGQKRPQSGRGSQGGRWWRSLSSGLSKKRQHSDQVTSKAKDETKSICHADTVSGDSSITNGSEDSKMGCSQTTQTASPKSEIKTDNSVAEICEIQPLRLLQNIHQSGVNCLHVSEIKGGQNNNSCNVYSIVSGGDDQALHHLTVELSLKSTNSDNGVVTTEIRHWTSGPEYEDITFQSWSKNYGIRFLNYVKIPSAHSSSVKGVWTDGSWVFSTGLDQRVRCWRLHDSKLVEHAHLIVSVPEPEALSARACVRNHYQIAVAGRGMQIVDFSVS 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00757 1376 SUPERFAMILY WD40 repeat-like 129 537 IPR036322 GO:0005515
Aip06g00757 1376 Gene3D - 461 887 IPR015943 GO:0005515
Aip06g00757 1376 Pfam WD domain, G-beta repeat 239 272 IPR001680 GO:0005515
Aip06g00757 1376 ProSiteProfiles Trp-Asp (WD) repeats profile. 241 272 IPR001680 GO:0005515
Aip06g00757 1376 SUPERFAMILY WD40 repeat-like 1069 1334 IPR036322 GO:0005515
Aip06g00757 1376 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 241 272 - -
Aip06g00757 1376 PANTHER WD REPEAT PROTEIN 16 1375 - -
Aip06g00757 1376 MobiDBLite consensus disorder prediction 1152 1185 - -
Aip06g00757 1376 SUPERFAMILY WD40 repeat-like 35 212 IPR036322 GO:0005515
Aip06g00757 1376 MobiDBLite consensus disorder prediction 1126 1185 - -
Aip06g00757 1376 MobiDBLite consensus disorder prediction 1134 1151 - -
Aip06g00757 1376 SUPERFAMILY WD40 repeat-like 519 845 IPR036322 GO:0005515
Aip06g00757 1376 Gene3D - 21 230 IPR015943 GO:0005515
Aip06g00757 1376 Gene3D - 231 428 IPR015943 GO:0005515
Aip06g00757 1376 ProSiteProfiles Trp-Asp (WD) repeats profile. 139 162 IPR001680 GO:0005515
Aip06g00757 1376 SMART WD40_4 323 363 IPR001680 GO:0005515
Aip06g00757 1376 SMART WD40_4 760 814 IPR001680 GO:0005515
Aip06g00757 1376 SMART WD40_4 494 536 IPR001680 GO:0005515
Aip06g00757 1376 SMART WD40_4 284 321 IPR001680 GO:0005515
Aip06g00757 1376 SMART WD40_4 106 153 IPR001680 GO:0005515
Aip06g00757 1376 SMART WD40_4 609 653 IPR001680 GO:0005515
Aip06g00757 1376 SMART WD40_4 1196 1246 IPR001680 GO:0005515
Aip06g00757 1376 SMART WD40_4 234 273 IPR001680 GO:0005515
Aip06g00757 1376 SMART WD40_4 1290 1327 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00757 Aip-Chr6 10110501 10118658 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00757 K24737 - gmx:100780968 2022.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00757 06 10110501 10118658 Aip06g00757 06 10110501 10118658 ECH