Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00752 ATGCAGAAGCAAAGGTTGGAGGGTAAGGTGGCTATAATCACTGGAGCAGCCAGTGGAATCGGAGAAGAAACGGTGAGACTCTTCGCCGAAAACGGAGCCTATGTCGTCGCCGCCGATGTTCAAGACGATCTCGGTCATCAAGTCATAGCTTCAATAGGCTCAGATAGAATCACCTACCGTCACTGTGACGTCAGAGACGAGAATCAGGTTGAAGAGACCGTCAATTTCACGTTGGAAAAGCACGGCCGCATCGATATCCTCTTCAGCAACGCCGGCATACTTGGGTCCCTTTCCGGTATCCTCGACCTTGATCTCAAAGATTTCGATAACACCATTGCCATCAACGTTCGCGGAGTGGCGGCAACGATAAAGCACGCGGCACGCGCCATGGTTGCTAAGAAAACCCGCGGCTCCATCATATGCACGACGAGCGTGGCGGCCACGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGAGATCGACCCGTTTAATCTTGGTCCTGATGAGGTAGAAGCTTCTACTTCGGAATATGCGAATCTGAAAGGGGTGGTGTTGAAGGCTCGGCATATTGCGGAGGCGGCGTTGTACCTTGCTTCAGATGAATCTGGTTACGTGAGTGGGCATAACTTGGTGGTTGACGGTGGTTTCACGGTGGTTAATGGCAGCTTCTCTGCAAGTTATAATTTGTTCACGAATAGTTAG 720 0.4819 MQKQRLEGKVAIITGAASGIGEETVRLFAENGAYVVAADVQDDLGHQVIASIGSDRITYRHCDVRDENQVEETVNFTLEKHGRIDILFSNAGILGSLSGILDLDLKDFDNTIAINVRGVAATIKHAARAMVAKKTRGSIICTTSVAATLXXXXXXXXXXXXXXGEIDPFNLGPDEVEASTSEYANLKGVVLKARHIAEAALYLASDESGYVSGHNLVVDGGFTVVNGSFSASYNLFTNS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00752 239 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Aip06g00752 239 PRINTS Glucose/ribitol dehydrogenase family signature 186 206 IPR002347 -
Aip06g00752 239 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Aip06g00752 239 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Aip06g00752 239 Gene3D - 1 156 - -
Aip06g00752 239 Gene3D - 166 231 - -
Aip06g00752 239 Pfam Enoyl-(Acyl carrier protein) reductase 173 223 - -
Aip06g00752 239 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 150 - -
Aip06g00752 239 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B 169 231 - -
Aip06g00752 239 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B 1 150 - -
Aip06g00752 239 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 225 IPR036291 -
Aip06g00752 239 Pfam short chain dehydrogenase 9 148 IPR002347 -
Aip06g00752 239 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 169 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00752 Aip-Chr6 10077220 10078096 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00752 6 224 Acyl Lipid Metabolism Gene Families AT3G55290 27.451 1.25e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00752 - - gmx:100811279 306.219