Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00751 ATGGATCCCATGAATCTAGACAGCAAGTCTGATTTGTTAAGGCCCATCGTCGTCGTTGCCATCTCCATCCTCCTCTGCCCTATCATCTCCATGACCACATTGTCTACCACTCCGATCGCTTCCTTCAGCTTTTTATCTGAACCAATGTTCAGAGAATCTTCTCATGATGTCCTAATGTCCAACAATCTATATTTCTTGCCGGAGAGTGAAGAAAGGCGTGCCCTTGGAGTAGTTGTGGAACTTGATTTTGAGGATGTTGTGGACGTTGTCGGGGTTGAAGGTGATGTTATCGAAGACATGGAAGTGGATGCTTTTGGTGCGACATGTGTGACAATTATACCATGGCTTAATCTTGGAGCTAAAGAGGAGGAAGGAAAAGATGGAAAAGAAAACTGTGAAGATTGGAAGGCAGGGTTGCAACTTGCAATTGTGACCGGGGGAGCAAGTGGAATAGGAGCAGAAGCAGCGAGGTTATTTGTGGAAAACGGTGCATTTGTTGTTATAGCAGATGTTAACGATGAATTGGGGCTTCAAGTTGCAAGTTCCATTGGCGTAGACAAGGTGAGTTACCATCACTGCGACGTTAGAGACGAGAAACAAGTTGAAGAAACCGTTGCTTTCGCTATCAAGAAATATGGAAGCCTAGATATCATGTTCAGTAACGCTGGAATTGCAGGCTCTTTCTATAAAATACTTGATTTGGATTTGAATGACTTcggtcgagtctcggttcgaattgaccgaccggttactgttggtttagcagttcaactccgGTTTCCACATCAAAGCAGCGAAGCCATATTAATATCAATGTCGTCTAAGCAAAGGTTGGAAGGCAAGGTTGCAATTGTGACCGGGGGAGCAAGTGGAATAGGAGCAGAAGCAGCGAGATTATTTGTGGAAAACGGTGCACTTGTAGTTATAACAGATGTTAACGATGAATTGGGGCTTCAAGTTGCAAGTTCCATTGGCGTAGACAAGGTGAGTTACCATCACTGCGACGTTAGAGACGAGAAACAAGTTGAAGAAACCGTTGCTTTCACTATCAAGAAATATGGAAGCTTAGATATCATGTTCAGTAACGCTGGAATTACAGGCTCTCTCTGTAACATACTTGATTTGGATTTGAATGACTTTGATAACACAGTAGCTGTGAATGTTCGTGGAGCAGCGGCGTGTATTAAGCACGCGGCACGTGTCATGGTGGAAAGAAAGACACGTGGCTCCATAATTTGCACTGCTAGTATAGCTTCTTTGGTTGGTGGCGCTGGAGCTGGTCATGGTTATACCGCATCCAAACATGGCCTTGTGGGTCTTGTGCGTTCGGCGTGTGGTGAGCTTGGAGCTTATGGGATTAGGGTCAATTCGATTTCACCTTATGTTATGGCCACACCTTTGGCATGTGAAGCTCTTGGTATGGAAGCAAGCGAAGTTGAAAGTGCTGGTGTTGCTGGTGCCAATTTGCAGGGGATTGTGTTGAAGCCAATTCATGTTGCACAAACGGCTTTGTTTCTTGCTTCTAATGAATCTGCTTATATTAGTGGACACAATTTGGTCGTTGACGGAGGTTTGTTAGCCGTTAATATCCCTGTTTCAAAAAATAAATGA 1611 0.424 MDPMNLDSKSDLLRPIVVVAISILLCPIISMTTLSTTPIASFSFLSEPMFRESSHDVLMSNNLYFLPESEERRALGVVVELDFEDVVDVVGVEGDVIEDMEVDAFGATCVTIIPWLNLGAKEEEGKDGKENCEDWKAGLQLAIVTGGASGIGAEAARLFVENGAFVVIADVNDELGLQVASSIGVDKVSYHHCDVRDEKQVEETVAFAIKKYGSLDIMFSNAGIAGSFYKILDLDLNDFGRVSVRIDRPVTVGLAVQLRFPHQSSEAILISMSSKQRLEGKVAIVTGGASGIGAEAARLFVENGALVVITDVNDELGLQVASSIGVDKVSYHHCDVRDEKQVEETVAFTIKKYGSLDIMFSNAGITGSLCNILDLDLNDFDNTVAVNVRGAAACIKHAARVMVERKTRGSIICTASIASLVGGAGAGHGYTASKHGLVGLVRSACGELGAYGIRVNSISPYVMATPLACEALGMEASEVESAGVAGANLQGIVLKPIHVAQTALFLASNESAYISGHNLVVDGGLLAVNIPVSKNK 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00751 536 Pfam Enoyl-(Acyl carrier protein) reductase 287 525 - -
Aip06g00751 536 Gene3D - 270 534 - -
Aip06g00751 536 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 417 445 IPR020904 GO:0016491
Aip06g00751 536 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 279 528 IPR036291 -
Aip06g00751 536 PRINTS Glucose/ribitol dehydrogenase family signature 354 365 IPR002347 -
Aip06g00751 536 PRINTS Glucose/ribitol dehydrogenase family signature 282 299 IPR002347 -
Aip06g00751 536 PRINTS Glucose/ribitol dehydrogenase family signature 430 449 IPR002347 -
Aip06g00751 536 PRINTS Glucose/ribitol dehydrogenase family signature 403 419 IPR002347 -
Aip06g00751 536 PRINTS Glucose/ribitol dehydrogenase family signature 451 468 IPR002347 -
Aip06g00751 536 PRINTS Glucose/ribitol dehydrogenase family signature 489 509 IPR002347 -
Aip06g00751 536 Gene3D - 138 269 - -
Aip06g00751 536 PANTHER OXIDOREDUCTASE-RELATED 140 241 - -
Aip06g00751 536 PANTHER OXIDOREDUCTASE-RELATED 274 531 - -
Aip06g00751 536 Pfam short chain dehydrogenase 141 242 IPR002347 -
Aip06g00751 536 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 409 417 IPR002347 -
Aip06g00751 536 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 430 449 IPR002347 -
Aip06g00751 536 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 354 365 IPR002347 -
Aip06g00751 536 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 141 242 IPR036291 -
Aip06g00751 536 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 140 241 - -
Aip06g00751 536 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 274 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00751 Aip-Chr6 10039047 10046626 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00751 278 532 Acyl Lipid Metabolism Gene Families AT3G55290 29.151 1.27e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00751 - - gmx:100798299 372.859