Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00745 ATGTCTATGCAAAGGTTGGAAGGAAAGGTGGCAATTGTGACCGGTGGAGCGAGTGGAATCGGAGCAGAAACAGTGAAGCTATTTGCCAAACACGGAGCATGCGTGGTTATAGCAGATATTCAAGATGACCTCGGTAAACAGGTTGCAACTTCCATTGGTACAGACAAGGTGAGTTACCGCCACTGCGACGTTAGAGACGAGAAACAAGTTGAAGAAACCGTTGCTTTCACCGTAGAAAAATACGGTGGCCTAGACATCATGTTCAGCAACGCCGGAGTTGCAGGTTCTCAAAGTAACGTCCTTGATATGGATTTGAATGATTTTGACAACACGATTGCAGTTAATCTGCGTGGATATGCAGTGTGCATAAAGCACGCTGCACGTGTCATGGTTGCAAGAAAGACACGTGGCTCCATAATATGCACCGCGAGTACGGTTGCAACGGTTTCTGTTGGAGGTTTTGATGGTAAGGGTTACGTTGCATCCAAGAGTGGTATTTTGGGGCTTGTGCGTTCAACTTGTGGTGACCTTGGAGAATTTGGGATTAGGGTTAATTCAATTTCACCCTATCTTATAGCTACCCCACTCGCAACTAGAGTTCTGAATCTGGATGCTAGTGAAGTTGAAGAGATTGCTGTTGCTGGTGCAAATTTGAAGGGGATTGTGTTGAAGCCGATCCATATTGCTCAAGCGGCTTTGTTTCTTGCTTCTGATGAATCTGCTTATATCAGTGGACACGACATGGTCGTTGATGGAGTTGTCCCATGCATGCCTTTGATTGAGAAAGAGGCAATGAATGGATCAGAGGATTGGCTTGCAAAACAAGTGACTGTTGAAATTTTGTTTGCACATCAAAGCAGCGAAGCCATATTAATATCAATGTCGTCTAAGCAAAGGTTGGAAGGCAAGGTTGCAATTGTGACCGGGGGAGCAAGTGGAATAGGAGCAGAAGCAGCGAGGTTATTTGTGGAAAACGGTGCACTTGTTGTTATAGCAGATGTTAACGATGAATTGGGGCTTCAAGTTGCAAGTTCCATTGGCGTAGACAAGGTGAGTTACCATCACTGCGACGTTAGAGACGAGAAACAAGTTGAGAAAACCGTTGCTTTCGCCATGGATAAGTACGGAAGCTTAGACATCATGTTCAGCAACGCTGGAGTTATGGGCTCTCTCTGTAACATACTTGATTTGGATTTGAATGACTTTGATAACACAGTAGCTGTGAATGTTCGTGGAGCAGCGGCGTGTATTAAACATGCGGCACGTGTCATGGTGGAAAGAAAGACACGTGGCTCCATAATTTGCACTGCTAGTGTAGCTTCTATGGTTGCACTTGGTGGCGATTCAGCAGGTCATGGTTATAACACATCCAAACATGGCCTTGTGGGTCTTGTGCGTTCCGCGTGTGGTGAGCTTGGAGCTTATGGGATTAGGGTCAATCCGATTTCACCTTATGTTATGGCCACACCTTTGGCATGTGAAGCTCTTGGTATGGAAGCAAGCGAAGTTGAAAGTGCTGGTGTTGCTGGTGCCAATTTGCAGGGGATTGTGTTGAAGCCGATTCATGTTGCACAAACGGCTTTGTTTCTTGCTTCTAATGAATCGGCTTATATTAGTGGACACAATTTGGTCATTGACGGAGGTTTGTTAGCCGTTAATTGCCCTGTTTCAAAAAGTAAATGA 1683 0.4528 MSMQRLEGKVAIVTGGASGIGAETVKLFAKHGACVVIADIQDDLGKQVATSIGTDKVSYRHCDVRDEKQVEETVAFTVEKYGGLDIMFSNAGVAGSQSNVLDMDLNDFDNTIAVNLRGYAVCIKHAARVMVARKTRGSIICTASTVATVSVGGFDGKGYVASKSGILGLVRSTCGDLGEFGIRVNSISPYLIATPLATRVLNLDASEVEEIAVAGANLKGIVLKPIHIAQAALFLASDESAYISGHDMVVDGVVPCMPLIEKEAMNGSEDWLAKQVTVEILFAHQSSEAILISMSSKQRLEGKVAIVTGGASGIGAEAARLFVENGALVVIADVNDELGLQVASSIGVDKVSYHHCDVRDEKQVEKTVAFAMDKYGSLDIMFSNAGVMGSLCNILDLDLNDFDNTVAVNVRGAAACIKHAARVMVERKTRGSIICTASVASMVALGGDSAGHGYNTSKHGLVGLVRSACGELGAYGIRVNPISPYVMATPLACEALGMEASEVESAGVAGANLQGIVLKPIHVAQTALFLASNESAYISGHNLVIDGGLLAVNCPVSKSK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00745 560 Gene3D - 289 559 - -
Aip06g00745 560 Gene3D - 1 257 - -
Aip06g00745 560 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 441 469 IPR020904 GO:0016491
Aip06g00745 560 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 146 174 IPR020904 GO:0016491
Aip06g00745 560 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 252 IPR036291 -
Aip06g00745 560 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 454 473 IPR002347 -
Aip06g00745 560 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 376 387 IPR002347 -
Aip06g00745 560 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 431 439 IPR002347 -
Aip06g00745 560 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Aip06g00745 560 PRINTS Glucose/ribitol dehydrogenase family signature 218 238 IPR002347 -
Aip06g00745 560 PRINTS Glucose/ribitol dehydrogenase family signature 180 197 IPR002347 -
Aip06g00745 560 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Aip06g00745 560 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Aip06g00745 560 PRINTS Glucose/ribitol dehydrogenase family signature 159 178 IPR002347 -
Aip06g00745 560 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 301 551 IPR036291 -
Aip06g00745 560 PANTHER OXIDOREDUCTASE-RELATED 296 556 - -
Aip06g00745 560 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 296 556 - -
Aip06g00745 560 PANTHER OXIDOREDUCTASE-RELATED 1 253 - -
Aip06g00745 560 Pfam Enoyl-(Acyl carrier protein) reductase 309 549 - -
Aip06g00745 560 Pfam Enoyl-(Acyl carrier protein) reductase 15 252 - -
Aip06g00745 560 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00745 Aip-Chr6 10006192 10009349 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00745 300 559 Acyl Lipid Metabolism Gene Families AT3G55290 28.986 1.19e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00745 - - cqi:110732338 379.022