Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00738 ATGCTCCCGCTAACACCGGTTCTCTTGACGGCGTCTTCTTCCTTGCTGGAAATAGCAAGGGGTAGGGTCCTGTTTCTCCATCCTGCATTTTTGCAAAGGCACCAAAATCCAAACACAAGAACAGATCTCAGCTCAGCTCAGACGAATTGCTCTCTTTCTCGGCTCTCCAAGATGGGTCTGTCATTCACGAAGCTATTCAGCAGGCTGTTCGCCAAGAAGGAGATGCGTATACTTATGGTCGGTCTCGACGCTGCCGGTAAGACCACCATTCTCTACAAGCTCAAGCTCGGAGAGATCGTTACCACCATTCCTACCATTGGGTTTAATGTGGAAACCGTCGAATATAAGAACATTAGCTTCACTGTCTGGGATGTTGGTGGCCAGGACAAGATCCGTCCTTTGTGGAGACATTACTTCCAAAATACACAAGGACTTATTTTTGTGGTAGATAGCAATGATCGTGATCGTGTTGTCGAGGCTAGGGATGAGCTCCATAGGATGTTGAATGAGGATGAGTTAAGAGATGCTGTGCTTCTAGTTTTTGCAAACAAACAAGATCTTCCAAATGCTATGAATGCTGCTGAAATAACTGATAAGCTTGGTCTTCATTCACTCCGTCAACGTCACTGGTATATCCAGAGCACCTGCGCTACATCTGGTGAAGGACTTTATGAAGGGCTTGATTGGCTCTCAAACAACATTGCAAACAAGGCTTAG 717 0.4603 MLPLTPVLLTASSSLLEIARGRVLFLHPAFLQRHQNPNTRTDLSSAQTNCSLSRLSKMGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00738 238 Gene3D - 61 238 IPR027417 -
Aip06g00738 238 TIGRFAM small_GTP: small GTP-binding protein domain 73 213 IPR005225 GO:0005525
Aip06g00738 238 Pfam ADP-ribosylation factor family 62 234 IPR006689 GO:0003924|GO:0005525
Aip06g00738 238 ProSiteProfiles small GTPase Arf family profile. 68 234 - -
Aip06g00738 238 SMART rab_sub_5 75 237 - -
Aip06g00738 238 SMART arf_sub_2 58 238 - -
Aip06g00738 238 CDD Arf1_5_like 75 233 IPR045872 GO:0003924
Aip06g00738 238 SMART sar_sub_1 58 234 IPR006689 GO:0003924|GO:0005525
Aip06g00738 238 PANTHER ADP-RIBOSYLATION FACTOR A1F 58 238 - -
Aip06g00738 238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 236 IPR027417 -
Aip06g00738 238 PRINTS GTP-binding SAR1 protein signature 131 156 IPR006689 GO:0003924|GO:0005525
Aip06g00738 238 PRINTS GTP-binding SAR1 protein signature 104 128 IPR006689 GO:0003924|GO:0005525
Aip06g00738 238 PRINTS GTP-binding SAR1 protein signature 176 197 IPR006689 GO:0003924|GO:0005525
Aip06g00738 238 PRINTS GTP-binding SAR1 protein signature 76 99 IPR006689 GO:0003924|GO:0005525
Aip06g00738 238 PANTHER ADP RIBOSYLATION FACTOR-RELATED 58 238 IPR024156 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00738 Aip-Chr6 9840417 9843300 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00738 K07937 - twl:119982669 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00738 06 9840417 9843300 Aip06g00738 06 9840417 9843300 ECH
Aip06g00738 06 9840417 9843300 Aip09g01356 09 23374034 23376987 ECH
Aip06g00738 06 9840417 9843300 Aip09g01356 09 23374034 23376987 PCT