Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00728 ATGGCGGCAGTAACAGTTACAGGCACGGCGCTGCCGAAGACACCATCGGCGTCTTCAATCAGGAGTTTCAGTGGTGAAAGGTTTTCGGTTCTGATATTTTGGAAGAACAAGAGAAGAATCTCACTGACCTGTTCTGCATCCAACAACACAAGCTCTTCTTCATCTTCATCTTCTGGATTGTACTCTGCTCAGAAATATGAACTGACGGCAGCAAACGTGGACATGGTTCTAGAGGACGTTCGGCCTTACCTGATTTCTGACGGCGGCAACGTGGAAGTGGTTTCTGTGGAAGACGGCGTCATATCTCTCAGACTCCAAGGAGCATGCGAGTCTTGTCCCAGCTCAACCACCACCATGAAGATGGGAATCGAACGCGTCCTCAAAGAAAAATTCGGAGACTCCGTCAAAGAAATTCAGCAACTATACGATGCTGAACCCAAGGAAACCACCATTGAGTATATTGGACCTGACTCCATTGCTTCTGGCATCAAAGCTGCCATCAAGGAGAGGTTCCCTGACATTCTCAATGTCACCTTCCAAGCCTGGGATTCCCATCATGGCAAGGAAGAAATACTGGGTTCACAGTGGAAAGTAAAAGAAAGGAATGTACCCTACAACTATCCGGGTGCTTTGGAGGCAAGGGATGCTCTTTCCCATTTTATCTAG 666 0.4775 MAAVTVTGTALPKTPSASSIRSFSGERFSVLIFWKNKRRISLTCSASNNTSSSSSSSSGLYSAQKYELTAANVDMVLEDVRPYLISDGGNVEVVSVEDGVISLRLQGACESCPSSTTTMKMGIERVLKEKFGDSVKEIQQLYDAEPKETTIEYIGPDSIASGIKAAIKERFPDILNVTFQAWDSHHGKEEILGSQWKVKERNVPYNYPGALEARDALSHFI 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00728 221 Pfam NifU-like domain 73 133 IPR001075 GO:0005506|GO:0016226|GO:0051536
Aip06g00728 221 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 71 135 IPR034904 -
Aip06g00728 221 Gene3D - 65 152 IPR034904 -
Aip06g00728 221 PANTHER NIFU-LIKE PROTEIN 1, CHLOROPLASTIC 150 179 - -
Aip06g00728 221 PANTHER NIFU-LIKE PROTEIN 1, CHLOROPLASTIC 45 152 - -
Aip06g00728 221 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 150 179 - -
Aip06g00728 221 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 45 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00728 Aip-Chr6 9682800 9684468 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00728 K22074 - aip:107646054 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00728 06 9682800 9684468 Aip06g00728 06 9682800 9684468 ECH