Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00724 ATGGCAAATAGAGCTGATCCTGATATTGACGACGATTTGCGTGATCTTTACAAGGAGTACACTGGTCCTCTGGGATCTGCTCCTACCAATACGCAAGATAGGGAAAAATCAAACAAAAGGTCTCATGCTGGTTCAGATGAAGAGGAGGAGCCACGGGACCCTAATGCTGTTCCAACCGATTTCACCAGCCGAGAGGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACTGAGAGGAATTGGAAGAAAAGGAAAGAAGAGGAAATGATCTGCAAACTTTGTGGAGAATCAGGGCATTTCACTCAGGGTTGTCCGACTACTCTTGGAGCAAACCGCAAGTCTCAAGATTTCTTTGAAAGGATACCCGCAAGGGATAAAAATGTAAGAGCGCTTTTCACAGAGAAAGTTCTAAACAAGATTGAAAGGGAAATTGGCTGCAAAATTAAGATGGATGAGAAATTTATTATTGTCAGTGGTAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCGGTACACAAGATTAGAGAGGAGGGTGAACAAAGAGGAACTTCTAGTTCTCACATGGCCAGGTCAAGGTCTCCTGAGCAAAGTCCTGTTGGTGCTCGGTTTCAACGATCTGAGCCCCAGAGGTCTCATTCTGGACCGCGAAATGCATCTCAGTTTCAACAAAGGTTTGGTAGGCAAGAGAGAGCTGTTGAAGACCGCGTGCGAGAGGACATGCAAAAGTTTGCAAGAGGTTCTCCACAAGCAAGAGCTTATGGTAATAGTGGAGCAAGAGGTCGGTCAAGCCATTCAAGATCTCCAAGACAGCCCCCTTACACAGGGAACTCATATAATTCAATTGATGGCCGCAATCAGAACATAGGATCTTATAGGAATGATGGGTGGGATTCTCACAGAAGAGAATCTGCAGGGATCCAACCCAGTCATCAGTTTGATTATAGCACTTCCCCCAAGACTTTAGAAGAATTAGAGTTGGAGTATAAGAAAGAGGCAACTGAGCTAATGAAAAACCGTGACAGGGAAGAAGATGAAGAAAATTTCAAGCATCGTGAGGCTGTTCGAGACTTGAGGGAGAACTACATGAACAAAGTTGCTATGTTAAGGGTCTCACATGCTAAACAATGGGAAGAGTTTCTTCAGCTTGAAGCCCACAGGCATCAACAGCACACAATCCAACAAATCCCTTCTGGTTTTGGCAGTTATAAGCAGCAGAATTTCACCGAATATGATGGTTCTGCTGTCAATCCTCACTATGCTGGGCCCAACTTACCCTTGGAATCGAGGAACAGGTTCTCAGACATGGAGAATTATCCTACCAGGCCTCATGATAATTTTGGTGAATTTCAGAGGCGTGGTGGAGATTTTGCAAAAGCTTTCAACAGATATTAA 1392 0.4418 MANRADPDIDDDLRDLYKEYTGPLGSAPTNTQDREKSNKRSHAGSDEEEEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPTTLGANRKSQDFFERIPARDKNVRALFTEKVLNKIEREIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGEQRGTSSSHMARSRSPEQSPVGARFQRSEPQRSHSGPRNASQFQQRFGRQERAVEDRVREDMQKFARGSPQARAYGNSGARGRSSHSRSPRQPPYTGNSYNSIDGRNQNIGSYRNDGWDSHRRESAGIQPSHQFDYSTSPKTLEELELEYKKEATELMKNRDREEDEENFKHREAVRDLRENYMNKVAMLRVSHAKQWEEFLQLEAHRHQQHTIQQIPSGFGSYKQQNFTEYDGSAVNPHYAGPNLPLESRNRFSDMENYPTRPHDNFGEFQRRGGDFAKAFNRY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00724 463 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
Aip06g00724 463 Coils Coil 321 345 - -
Aip06g00724 463 MobiDBLite consensus disorder prediction 176 315 - -
Aip06g00724 463 MobiDBLite consensus disorder prediction 227 244 - -
Aip06g00724 463 MobiDBLite consensus disorder prediction 1 68 - -
Aip06g00724 463 ProSiteProfiles Zinc finger CCHC-type profile. 90 104 IPR001878 GO:0003676|GO:0008270
Aip06g00724 463 PANTHER OS01G0252900 PROTEIN 1 463 - -
Aip06g00724 463 MobiDBLite consensus disorder prediction 184 226 - -
Aip06g00724 463 MobiDBLite consensus disorder prediction 256 293 - -
Aip06g00724 463 MobiDBLite consensus disorder prediction 33 55 - -
Aip06g00724 463 PANTHER OS01G0252900 PROTEIN 1 463 - -
Aip06g00724 463 MobiDBLite consensus disorder prediction 1 18 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00724 - - gmx:100806099 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00724 06 9626051 9629796 Aip06g00724 06 9626051 9629796 ECH