Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00716 ATGGCTCCCCCAAATGAAGCAACCTTGAACCCCAGCTACTCATTTGAAAATGTTTTTGATCTCTCTGATGCAAAGTTTTACGTCAAAGGATTCCCACTTCTCACTCAAGTCCCTCACAATGTTTCTTTCACTCCATTCTCTTCAAAATCCCATTCCTCTGATGATGCACCACCTTCACTACTTAACCGTGTTCTTGCTGCTTCTCACAGAGGTGGATTCCTCGGATTCTCACACTCTGATCCCTCTGATAGGTTGATGAACTCCTTGGGAAGTTTCACTGATAGAAACTTTCTAAGCATATTCAGGTTCAAGACATGGTGGTCAACCCAGTGGGTTGGAACCTCTGGCTCTGATCTTCAGATGGAAACTCAATGGGTTCTGCTTCATGTTCCTGAGCTCAACTCCTATGTTGTCATCATTCCAATCATTGAAGCAAGTTTCAGGTCTGCACTTCACCCTGGCTCTGATGGACACATCATGATTTGTGCAGAGAGTGGTTCTACAAAAGTGAAAGCTTCAAGCTTTGATGCAATTGCTTACATTCACTTTTCTGAGAATCCTTACACTTTGATGAAGGAGGCTTTCTCTGCTCTGAGGGTTCATCTCAACACTTTTAAGCTCTTGGAGGAGAAGAATCTTCCTTCCCTTGTTGACAAGTTTGGTTGGTGCACTTGGGATGCTTTTTACTTAACCGTGCAACCAATTGGTATATGGCATGGTTTGAAGGATTTCGCGGATGCTGGCGTGTCGCCCAGGTTTCTTATTATTGATGATGGATGGCAGAGTATTAATTTAGATGGTGGTGATCCTAAAGAGGATGCAAAAAATCTCATTCTCTGTGGTGATCAAATGAATGCAAGGCTTCATAGGCTTGATGAATGTGGAAAGTTTAGAAGATACAAATCAGGACAATTCTTGGGTCCTAATCCTCCTCCTTTTGATCCGAACAACGCGAAATTGTTGATAGGAAAGGGTATTGAGCTTGAACATTTGAACAGGGATAAGGAAGCTGCAAAGAACACTCAAAGCTCTGAATTGGGTCTAATTGAATCCAAGATTCAGACAGTGAAAGGAGAGATTGATGTTCTGTTTGGAGGTGCAGAACAAATTGAAAAGAAAGATTGTGGAAGCTCTTGTTCTTGTAAAGAAGAAGAAGAGTATGGAATGAAGGCTTTCACCAAAGATTTAAGGACTAAGTTTAAAGGTTTGGATAATATTTATGTATGGCATGCACTTTGTGGTGCATGGGGTGGTGTTAGGCCAGGAGCTACAACCCTTAATTCCAAACTTGTCCCTTGCAAACTCTCACCGGGACTTGATGGAACAATGCATGATCTCGCTGTGGTTAGAATCGTTGAAGGTTCCATTGGTCTTGTTCATCCTGATCATGCCAGTGACTTTTATGATTCCATGCACTCTTATCTTGCTCAATCTGGTGTTACAGGAGTCAAAGTTGATGTTATTCATTGTCTTGAATATGTGTCTGATGAATATGGAGGCAGAGTTGAGCTTGCAAAGGCTTATTATGATGGATTGACAAATTCTATGGCCAAGAATTTCAATGGAAGTGGACTCATTGCTAGCATGCAACAGTGCAATGACTTTTTCTTCTTGGGAACAAAGCAAGTTTCCATGGGAAGAGCTGGCGATGATTTTTGGTTCCAAGATCCAAATGGTGACCCTATGGGAGTGTTCTGGCTTCAAGGGGTGCACATGATTCATTGTTCATACAACAGTTTGTGGATGTCACAAATGATTCTACCAGATTGGGACATGTTTCAATCAAACCATGTTTGTGCCAAATTCCATGCAGCTTCTAGGGCCATTTGTGGTGGTCCAATCTATTTGAGTGACCATGTAGGTTCCCATGATTTTGATCTCATTAAGAAGCTTGTTTTCCCTGATGGCACCATACCCAAGTGTATACACTTCCTTCTTCCTACCAGAGACTGTCTCTTCAAAAATCCTCTTTTTGACCATAAAACTGTTCTCAAAATTTGGAACTTAAACAAGTATGGAGGAGTTATTGGTACTTTCAATTGCCAAGGGGCTGGTTGGGATCCTAAAGAGCACAGGTTAAGGGGTTATCCTGAATGTTACAAGTCAATAGATGGTTCAGTTCATGTGAATGAAGTTGAGTGGGATCAGAATGACGAAACTGCCCCCATGGGTGAGGCAGAGGAGTATGTAGTGTACCTTAACCAAGCTCAAGAACTTGCTTTGATGACTCCTAATTCTGAACCAATTGAATTTACCATCCAACCTTCCAGCTTTGAGCTCTATAGCTTTGTGCCAATAACAAAGATAGGTGGCACTGGCAGCATCAAATTTGCACCAATTGGACTAACAAATATGCTCAATAATGGAGGTGTAATTCAAGAAGTGGAATATGTTGAGGGTGTTGCTATGCTTAAGGTTAAGGGTGATGGCCAATTTTTGGCTTACTCAAGTGAACCTCCAAAGAAGTTCCAAGTGAATGGTTCTGATGTGGATTTTGAGTGGCTTCCTAATGGCAAATTGATGGTTAACCTTTCTTGGATTCAAGAGGATAATGGTGTTTCTGATTTAGCAATTTTTTTTTAA 2583 0.4139 MAPPNEATLNPSYSFENVFDLSDAKFYVKGFPLLTQVPHNVSFTPFSSKSHSSDDAPPSLLNRVLAASHRGGFLGFSHSDPSDRLMNSLGSFTDRNFLSIFRFKTWWSTQWVGTSGSDLQMETQWVLLHVPELNSYVVIIPIIEASFRSALHPGSDGHIMICAESGSTKVKASSFDAIAYIHFSENPYTLMKEAFSALRVHLNTFKLLEEKNLPSLVDKFGWCTWDAFYLTVQPIGIWHGLKDFADAGVSPRFLIIDDGWQSINLDGGDPKEDAKNLILCGDQMNARLHRLDECGKFRRYKSGQFLGPNPPPFDPNNAKLLIGKGIELEHLNRDKEAAKNTQSSELGLIESKIQTVKGEIDVLFGGAEQIEKKDCGSSCSCKEEEEYGMKAFTKDLRTKFKGLDNIYVWHALCGAWGGVRPGATTLNSKLVPCKLSPGLDGTMHDLAVVRIVEGSIGLVHPDHASDFYDSMHSYLAQSGVTGVKVDVIHCLEYVSDEYGGRVELAKAYYDGLTNSMAKNFNGSGLIASMQQCNDFFFLGTKQVSMGRAGDDFWFQDPNGDPMGVFWLQGVHMIHCSYNSLWMSQMILPDWDMFQSNHVCAKFHAASRAICGGPIYLSDHVGSHDFDLIKKLVFPDGTIPKCIHFLLPTRDCLFKNPLFDHKTVLKIWNLNKYGGVIGTFNCQGAGWDPKEHRLRGYPECYKSIDGSVHVNEVEWDQNDETAPMGEAEEYVVYLNQAQELALMTPNSEPIEFTIQPSSFELYSFVPITKIGGTGSIKFAPIGLTNMLNNGGVIQEVEYVEGVAMLKVKGDGQFLAYSSEPPKKFQVNGSDVDFEWLPNGKLMVNLSWIQEDNGVSDLAIFF 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00716 860 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 4-RELATED 1 860 - -
Aip06g00716 860 Pfam Raffinose synthase or seed imbibition protein Sip1 20 843 IPR008811 -
Aip06g00716 860 SUPERFAMILY (Trans)glycosidases 215 631 IPR017853 -
Aip06g00716 860 PANTHER - 1 860 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00716 Aip-Chr6 9531904 9534835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00716 1 860 Glycoside Hydrolase AT4G01970 57.652 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00716 K06611 - gmx:100815922 1330.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00716 06 9531904 9534835 Aip06g00716 06 9531904 9534835 ECH