Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip06g00706 | ATGGCTTATAACAATAGCCTTCTCCTCATTGTGACACTCTCCTCTCTCCTCCTTTCAGGCCATGCCTATCGATACACGGGGAAGTCAATCTGGTTCACTAATCCAGCCCCCGCCCCGGCCCCCGTCCCGGTCACGGTCACATTTGAAACCACCAATCCAGTTAACGGCCTCTTCAGCGGCTTGAACTTGAACCTCAAGCTAGACGCTAAAGGTGATGATACGAAAATCAAGGCCCAGGTCGATAATTTCTGCAATGGCGTGGAGAACCCTGGGTTGTGTGCCGAAACCATTGTACCATTGGTGAAGGGCCAATTGGATCCACTCAAGGTCCTTGACACTCAGATGAGCGCCACTCTGAACCGCACCTTGGAGGTTGTGGCCGAGATCGCCAAATTACTGAAGAGCCAAAAGAAGCCAGTGGGTGGTCTGGACGTCTGCAAGGAGTGCTATGACTCCGCAGTAGATACCATCAATGAATCTATTGAGCTCGTGAAGCAGTACAACGTGGTTGATGCTTACCACAGGTTCGGCAATGTTAATAGTTACAGCAGAACCTGCGATGATACTTTCGCTGAATTGGAAGTCACCAACCCTATTCCCAAGGGATGA | 609 | 0.5057 | MAYNNSLLLIVTLSSLLLSGHAYRYTGKSIWFTNPAPAPAPVPVTVTFETTNPVNGLFSGLNLNLKLDAKGDDTKIKAQVDNFCNGVENPGLCAETIVPLVKGQLDPLKVLDTQMSATLNRTLEVVAEIAKLLKSQKKPVGGLDVCKECYDSAVDTINESIELVKQYNVVDAYHRFGNVNSYSRTCDDTFAELEVTNPIPKG | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip06g00706 | 202 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 77 | 199 | IPR006501 | GO:0004857 | |
| Aip06g00706 | 202 | CDD | PMEI-like_2 | 78 | 199 | - | - | |
| Aip06g00706 | 202 | Pfam | Plant invertase/pectin methylesterase inhibitor | 80 | 192 | IPR006501 | GO:0004857 | |
| Aip06g00706 | 202 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 79 | 195 | IPR035513 | - | |
| Aip06g00706 | 202 | SMART | PMEI_2 | 75 | 202 | IPR006501 | GO:0004857 | |
| Aip06g00706 | 202 | PANTHER | PECTINESTERASE | 2 | 192 | - | - | |
| Aip06g00706 | 202 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 77 | 202 | IPR035513 | - | |
| Aip06g00706 | 202 | PANTHER | PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR | 2 | 192 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip06g00706 | Aip-Chr6 | 9366399 | 9367007 | Proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip06g00706 | - | - | ahf:112756681 | 227.639 |