Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00684 ATGGGAAACCATGTCTCATTTGGCGCCTCACATGTAAGGGGCAAAATTGTGTTCTGCGATGGATCCGTTCAAGAATTCGACGAGCCGTTAACGGCGGCGGAGCTCATGTTAGAGCATCCGCAACAGGTGGTGGTGGAGATGGACTCCGCCATGAAGGAGAGAAGGCCAACTCCATTGCCTGCTGACAAGAAGTTAGAGATGAGAAAAATGTACGTGATGCTTCCGGTGAAGCGAGGGAAGGCGGTGGGACTGAGCGGCGAAGAGTGCCGCCGCATTGTGATGATGGTTAATTATTCTGCCACACTTCATTGCAAGTACAACGATCTTGCGGTGTGTTCTCCAAGGCTTCTTCCTTGGATCGCAAGGCTTTGGCGGAACAATGAAATGTTGCAGAGAAAGGAGGAAAACATGGCGGGGAATAATATTGAGCAACTAGTGCCGGAAATCATTGAAGACAGGCCGGAATATTATCTGAGTAGGCAAATGTCCGGGAAAGGATGGAAGCCTAGCTTGGACACCATTAAGGAGAAGAACAAGATTAACACAAAACTCTCTCGTTGGTTCTTCATCAAAAGTTTTTAA 582 0.4811 MGNHVSFGASHVRGKIVFCDGSVQEFDEPLTAAELMLEHPQQVVVEMDSAMKERRPTPLPADKKLEMRKMYVMLPVKRGKAVGLSGEECRRIVMMVNYSATLHCKYNDLAVCSPRLLPWIARLWRNNEMLQRKEENMAGNNIEQLVPEIIEDRPEYYLSRQMSGKGWKPSLDTIKEKNKINTKLSRWFFIKSF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00684 193 Pfam PADRE domain 1 176 IPR025322 -
Aip06g00684 193 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 184 - -
Aip06g00684 193 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00684 Aip-Chr6 9126379 9126960 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00684 - - adu:107492297 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00684 06 9126379 9126960 Aip06g00684 06 9126379 9126960 ECH
Aip06g00684 06 9126379 9126960 Aip09g01288 09 21415962 21416555 PCT