Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00647 ATGCCGAATCAACCTAAGCTCGGTCGAGTTCCCAGCATCAGAGACAGAGTTCAAGACACTCTCTCTGCTCACCGCAACGAACTCGTTTCTCTCCTCTCCAGGTATGTGGCTCAGGGGAAAGGGATTTTGCAACCTCATAGTTTGATCGATGAGCTTGAAAATATCCTTGGTGAGGATCAATCTACAGTGGAGCTTAAAAATGGTCCCTTTGGCGAAATCATCAAGTCTGCACAGGAAGCCATAGTTTTGCCTCCCTTTGTGGCCATAGCAGTTCGTCCAAGACCTGGTGTGTGGGAATATGTCCGTGTTAATATATTTGAACTCAGTGTGGAGCAATTGAGTGTTTCTGAATATCTCAGCTTCAAGGAAGAACTTGTAGATGGACAGATTAACGATAATTTTGTGCTGGAGCTTGATTTTGAACCATTTAATGCATCATTTCCACGCCCCACTCGTTCATCATCCATTGGCAATGGTGTCCAATTTCTCAATCGCCACCTTTCTTCAAGTATGTTTCGCAACAAAGATTCCTTGGAGCCCTTGCTTGAATTCCTACGTGTTCACAAGTATAAAGGCCATGCACTGATGTTAAATGACCGTATACAAAGCATTTCCAAACTTCAATCTGCTCTGGCCAAGGCTGAGGAGTATCTTTCTAAGCTTGCACCTGAAACACTTTATTCCGAGTTTGAATATGTGTTACAAGGAATGGGTTTTGAGAGGGGTTGGGGTGACACTGCTGAACGTGTATTAGAGAACATGCATTTGCTATTGGATATTCTCCAGGCTCCTGATCCTTCTATACTAGAGACTTTTCTTGGGAGAGTGCCTATGGTGTTTAATGTTGTTATATTATCTCCTCATGGCTACTTTGGCCAAGCCAATGTCCTGGGTTTGCCTGACACGGGAGGACAGGTTGTTTATATACTAGATCAAGTCCGTGCCCTTGAGAATGAGATGCTCCTTCGGATCCAGAAGCAAGGACTTGATTTTACTCCTAGAATTTTGATTGTTACCAGGTTGATACCTGATGCAAAGGGTACAACATGCAACCAGCGGCTAGAAAGAGTCAGTGGTACTGAGTACACTCATATTTTGCGAGTTCCATTCAGATCTGATAAAGGAACCCTCAAGAAATGGATCTCGAGGTTTGATGTCTGGCCATATCTTGAGACTTATGCAGAGGATGTTGCCAGTGAAATTGCTGCTGAGTTACAAGGTTATCCAGATTTCATCATTGGAAACTACAGTGATGGGAACCTTGTTGCATCTTTATTGGCTTATAAGATGGGAGTTACCCAGTGCACAATTGCGCATGCGCTGGAGAAGACAAAATATCCAGATTCAGATATATATTGGAAGAAATTTGAGGATAAATATCATTTTTCATGTCAGTTCACTGCTGACTTAATAGCTATGAATAATGCAGATTTTATCATCACTAGTACATACCAAGAGATTGCGGGGACGAAGAATACTGTTGGCCAGTATGAGAGCCACACTGCTTTTACTCTTCCTGGACTCTATAGGGTTGTCCATGGCATTGATGTGTTTGATCCCAAGTTCAATATTGTCTCTCCTGGAGCAGACATGTCAATCTATTTCCCCTACTCCGACAAACAGAAAAGATTAACATCTCTGCATGGTTCCATTGAAAAGCTATTATTTGATCCTGAGCAGACTGATGAGCACATTGGCACGCTGAAAGACAAGTCAAAGCCTATAATCTTCTCCATGGCAAGGCTAGACAGAGTAAAAAACATCTCTGGCTTGGTAGAAAGCTTTGCTAAGAACAACAAATTGAGGGAATTGGTGAACCTTGTGGTGGTTGCTGGTTATATTGATGTGAAAAAGTCAAGGGACAGAGAAGAAATATCAGAAATTGAGAAGATGCATGGTCTCATAAAAGAGTACAATCTCGATGGTGATTTTCGGTGGATTGCTGCCCAAACAAATAGAGCACGTAATGGTGAGCTGTATCGTTACATAGCGGACACAAAAGGTGTTTTCGTTCAGCCTGCTTTCTATGAAGCTTTTGGTCTTACAGTTGTGGAGGCCATGACTTGTGGCCTTCCCACATTTGCTACCTGCCATGGTGGTCCTGCTGAGATCATCGAACATGGTGTATCAGGATTCCATATTGATCCTTATCACCCTGACCAAGTTTCTGAGATTTTGCTTGGATTCTTCCAAAAATGCAATGAAGATCCAAGCCATTGGAATAAAATATCTGATGGTGGTCTTCAAAGAATTTATGAAAGGTACACATGGAAGATATATTCTGAAAGGCTTATGACCTTGGCTGGAGTTTATAGTTTCTGGAAACACGTCTCCAAATTAGAAAGGCGTGAAACCCGAAGATATCTTGAGATGTTCTATATTCTGAAGTTCCGCGATTTGGTAAATTCAGTTCCGCTGGCAAAGGATGATGATGCAAATTAG 2442 0.4218 MPNQPKLGRVPSIRDRVQDTLSAHRNELVSLLSRYVAQGKGILQPHSLIDELENILGEDQSTVELKNGPFGEIIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNIFELSVEQLSVSEYLSFKEELVDGQINDNFVLELDFEPFNASFPRPTRSSSIGNGVQFLNRHLSSSMFRNKDSLEPLLEFLRVHKYKGHALMLNDRIQSISKLQSALAKAEEYLSKLAPETLYSEFEYVLQGMGFERGWGDTAERVLENMHLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTEYTHILRVPFRSDKGTLKKWISRFDVWPYLETYAEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSDKQKRLTSLHGSIEKLLFDPEQTDEHIGTLKDKSKPIIFSMARLDRVKNISGLVESFAKNNKLRELVNLVVVAGYIDVKKSRDREEISEIEKMHGLIKEYNLDGDFRWIAAQTNRARNGELYRYIADTKGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVSEILLGFFQKCNEDPSHWNKISDGGLQRIYERYTWKIYSERLMTLAGVYSFWKHVSKLERRETRRYLEMFYILKFRDLVNSVPLAKDDDAN 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00647 813 TIGRFAM sucr_synth: sucrose synthase 25 806 IPR012820 GO:0005985|GO:0016157
Aip06g00647 813 Pfam Sucrose synthase 9 556 IPR000368 GO:0005985|GO:0016157
Aip06g00647 813 Pfam Glycosyl transferases group 1 562 740 IPR001296 GO:0016757
Aip06g00647 813 Gene3D Glycogen Phosphorylase B; 530 757 - -
Aip06g00647 813 CDD GT4_sucrose_synthase 281 766 - -
Aip06g00647 813 Gene3D - 26 148 - -
Aip06g00647 813 Gene3D - 149 278 - -
Aip06g00647 813 PANTHER - 2 811 IPR012820 GO:0005985|GO:0016157
Aip06g00647 813 Gene3D Glycogen Phosphorylase B; 283 800 - -
Aip06g00647 813 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 298 766 - -
Aip06g00647 813 PANTHER SUCROSE SYNTHASE 2 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00647 Aip-Chr6 8455113 8461365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00647 4 810 Glycosyltransferase AT4G02280 83.271 0.0 1431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00647 K00695 - gmx:100802045 1509.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00647 06 8455113 8461365 Aip06g00647 06 8455113 8461365 ECH