Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00646 ATGTGTCACTTCACCTTCCTCGGTTGGTTGCTTCTTTCTCTCTCACTCAACATGCCTCTCTTCCTTCCTTCTTTGTTTTTCCTTCTAACTCTTCTCTCAACCACTCTTCTCTCTCACTCCTTCCCCTTCCCCAACCATGGCCACCGCCCTCACCCTCACCGCTTCGCCTCTCACAACTACAGAGATGCTCTCAGCAAGTCCATCATCTTCTTTGAAGGCCAGAGGTCTGGCAAGCTCCCTTCTAACCAGAGGATAACTTGGAGGAGAGACTCTGCTCTCTCTGATGGCTCTGCCATGCATGTTGATTTGGTGGGAGGGTACTACGATGCAGGGGACAATGTGAAGTTCGGTTTTCCGATGGCATTCACGACCACCATGCTCTCATGGAGTGTTCTCGAGTTCGGTGGGGTCATGAAGGGCGAGTTGCAGAATGCCAGAGAGGCCATTCGCTGGGGAACTGATTACCTTCTCAAAGCCACTGCACATCCTGGCACCATTTATGTTCAGGTGGGAGACGCTAAGAAGGACCACGCGTGTTGGGAGAGGCCAGAAGACATGGATACTCCAAGAAATGTGTACAAGATAGACAAGAGTACCCCCGGTTCAGAGGTGGCCGCGGAAACCGCTGCGGCTCTTGCAGCTGCTTCTCTTGTTTTCAAGAAAACCGACCCCACCTACTCCAAAATTTTGGTTAGGAGGGCCATCTCTGTTTTCCAATTTGCTGATAAATACAGAGGATCATACAGCAATGGGTTGAAGCCATTTGTGTGCCCGTTCTACTGCTCTTACTCTGGTTATGAGGATGAGCTTCTTTGGGGTGCTGCTTGGTTGCACAAGGCTACTAGGAACTCCATCTATCTTAACTACATTAAGGTTAATGGACAAACACTTGGTGCTGCAGAATCTGACAATACATTTGGGTGGGATAACAAGCATGTTGGAGCAAGAATCCTTCTCTCTAAGGAATTTCTAGTTCAGAAAGTGCAAACCCTACATGACTACAAGGGTCACGCGGACAATTTCATCTGTTCCCTCATTCCAGGAACCTCTTTCTCTTCCGCACAATACACACCAGGTGGCCTTCTATTCAAGATGAGTGATAGCAACATGCAGTATGTTACATCCACCTCCTTCCTTCTCTTAACCTATGCCAAGTACTTGACCAAATCCCACACCGTCGTCAACTGTGGCGGCACCACCGTTACTCCCAAGAGGCTCCGTGCAATAGCCAAAAAGCAGGTGGATTACTTGCTGGGAGATAATCCCTTGAAGATGTCGTACATGGTGGGGTATGGTCCAAGGTACCCAAGAAGGATACACCACCGGGGATCATCTCTGCCGTCCATTTCTGTACACCCTGGCAAGATCCAATGCTCAGCAGGGTTCGGTGTCATGAACTCACAAGCCCCCAACCCCAACGTTCTTGTTGGTGCTGTGATTGGAGGGCCGGATCTGCATGATAGGTTCCCGGATCAACGGTCAGATTATGAGCAGTCAGAGCCAGCCACTTATATCAACGCACCTCTTGTGGGTGCACTCGCTTATCTTGCACACTCATTTGGCCAACTCTGA 1572 0.4968 MCHFTFLGWLLLSLSLNMPLFLPSLFFLLTLLSTTLLSHSFPFPNHGHRPHPHRFASHNYRDALSKSIIFFEGQRSGKLPSNQRITWRRDSALSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVLEFGGVMKGELQNAREAIRWGTDYLLKATAHPGTIYVQVGDAKKDHACWERPEDMDTPRNVYKIDKSTPGSEVAAETAAALAAASLVFKKTDPTYSKILVRRAISVFQFADKYRGSYSNGLKPFVCPFYCSYSGYEDELLWGAAWLHKATRNSIYLNYIKVNGQTLGAAESDNTFGWDNKHVGARILLSKEFLVQKVQTLHDYKGHADNFICSLIPGTSFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTKSHTVVNCGGTTVTPKRLRAIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSISVHPGKIQCSAGFGVMNSQAPNPNVLVGAVIGGPDLHDRFPDQRSDYEQSEPATYINAPLVGALAYLAHSFGQL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00646 523 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 416 442 IPR018221 -
Aip06g00646 523 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 489 507 IPR033126 -
Aip06g00646 523 Pfam Glycosyl hydrolase family 9 60 513 IPR001701 GO:0004553|GO:0005975
Aip06g00646 523 Gene3D - 56 523 IPR012341 GO:0005975
Aip06g00646 523 PANTHER ENDOGLUCANASE 17 29 523 - -
Aip06g00646 523 PANTHER ENDO-1,4-BETA-GLUCANASE 29 523 - -
Aip06g00646 523 SUPERFAMILY Six-hairpin glycosidases 57 521 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00646 Aip-Chr6 8452847 8454993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00646 18 519 Glycoside Hydrolase AT1G02800 73.861 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00646 K01179 - gmx:100789144 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00646 06 8452847 8454993 Aip06g00646 06 8452847 8454993 ECH