Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00620 ATGGCACGCGCCATGAAAATCTTCTCATTGATGGCAATCTGCGTGATGATGGTGGCACAGCAAGTTGCGGCAGTCGAGGAGGCAGCCGGGGCACCAAGCCATGGACCCCAGGGACCAGAACTGATCAAGTTTCTTTGCTCGATGTCACCAAAAAAGGATCTGTGCCTGAAAGTGTTGTTCTCTGACCCATCAGAGTTAGCCGGCGCAGGCCTGACCGACTTGGCAGTGGTGGCACTGAGGGCGGCGTCCCTGGACGCCTCCAGCATGCTGGACGACGTTACCAGATTCATCGATGATCCAGACATGAGCCCAGCCATCCAGCAGGGTTTGTCTGACTGCAAGGAGAACGTCTTGGACGCCGGAATGCAGCTGGATGACGCCGTTGCTTCCTTGTTGCAGGGTGCTGACAGAGACGCACACACCTGGCTCCGCGCTGCTTATGCCGCCATTGACACCTGCGATGCTTCTATTCCCGGAGATGATGATATTCTCTCCGTTAAGAGCAGGCAGCTCCGTACCCTTGTCGACCTTGCCACCGCCATCACCAATTTCTTGCCAAATAAGAACCTCCAAAGCTAG 579 0.5579 MARAMKIFSLMAICVMMVAQQVAAVEEAAGAPSHGPQGPELIKFLCSMSPKKDLCLKVLFSDPSELAGAGLTDLAVVALRAASLDASSMLDDVTRFIDDPDMSPAIQQGLSDCKENVLDAGMQLDDAVASLLQGADRDAHTWLRAAYAAIDTCDASIPGDDDILSVKSRQLRTLVDLATAITNFLPNKNLQS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00620 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 185 IPR035513 -
Aip06g00620 192 SMART PMEI_2 37 181 IPR006501 GO:0004857
Aip06g00620 192 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 183 IPR006501 GO:0004857
Aip06g00620 192 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 182 - -
Aip06g00620 192 PANTHER PECTINESTERASE 1 182 - -
Aip06g00620 192 Pfam Plant invertase/pectin methylesterase inhibitor 41 181 IPR006501 GO:0004857
Aip06g00620 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 186 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00620 Aip-Chr6 8077590 8078168 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00620 - - adu:107492430 350.517