Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00613 ATGCACTCCTCCAAGCCCCCTCGCCGGAAAGTCGCTCCGGCGAACGGCGACGACTCAGGTGACAAGCTCGACCAACTCCTCCTTTCCTCTGCCATCTGCAACAACGAGGACCTCGGCCCCTTTATCCGCAAGGCCTTCGCCTCCGGTAAGCCGGAGACGCTCCTCCACCACCTCCGCCAGTTTGCGCGCTCCAAAGAGTCCGAGATCGAGGAGGTCTGCAAGGCACACTACCAGGACTTCATCCTCGCTGTCGATGACCTCCGATCTCTTCTCTCCGACGTCGACGACCTTAAGTCCTCCCTCTCTGACTCCAACTCTAAGCTCCAGTCTGTCGCGCGTCCTCTACTCTCATCGCTTGACGCCTTCGTCGAGACACGAAACGTCTCGCGGAACGTCAACCTCGCAATTGAATCGGTGCATACATGCGTGGAGTTGATGGAGGTGTGCTCACGCGCCAACCGCCACCTCGCCGGCGACAACTTCTACATGGCGCTAAAGTGTGTTGACACGCTCGAGAGGGAATACTTGGAGAAGACGCCGTCAACGACGCTGAAGAGGATGCTAGAGAGAAAGATCCCGGAGATCCGGTCGCACATAGAGAGGAAGGTGAGTAAGGAGTTCGGCGACTGGCTGGTTGAGATCCGAGTGGTGAGTCGCAACCTTGGACAGCTGGCGATTGGCCAAGCTTCAGCAGCGAGGCAGAGAGAAGAAGATCTCAGGATCAAGCAGCGCCAGGCAGAGGAGCAGAGCAGGCTCAGCGTTAGGGATTGCATTTACGCTTTGGAGGAGGAGGAAGATGATGAAATTGCCGCTGGTAGCGGTATCGGTGAGGATGGATACGGAAACGGAGGTGGAATTATTGCGGGTTTCTTTGTGGTAGAGGATAGGGTTTTGAGGACTGGCGGTGGTTTGATATTGAAGATGGAGGTTGAGAATTTGTGGGATATTGCTGTTAGCAAGATGTGTTCTGTGTTGGAGGATCAGTTCTCCAGAATGCAGACTGCCAATCATCTCTTGCTCATTAAGGACTATGTGAGCCTTTTGGGAGTGACTCTGCGGAGGTATGGGTACCCGATTGATGCATTGCTAGATGTTTTGAGCAAACACAGGGATAAATATCACGAGCTTCTGTTGTCAGATTGTCGGAAGCAGATTGCTGAGGCACTTGCTGCTGATAAGTTTGAGCAGATGTTGATGAAGAAAGAGTATGAGTATTCCATGAATGTGCTTTCTTTCCAAATACAAACGTCGGATATTGTACCTGCTTTTCCTTATGTTGCACCATTTTCGACAACTGTGCCTGATTGTTGCCGCATTGTGCGGTCCTTCATTGAGGATTCTGTGAGTTTCATGTCTTATGGTGGGCAGCTTGAGTTCTATGAAATCGTTAAGAAATATTTAGACAGGCTTTTGACCGAGGTCTTAGATGAAGCTTTGTTAAAGCTTATTAATACATCAGTTAGTGGTGTGCCCCAGGCAATGCAAATGGCAGCAAATATGACTGTATTCGAGCGTGCATGTGATTTCTTCTTTCGCCATGCTGCACAGCTCTCAGGGATTCCATTGAGAATGGTGGAGAGAAGCAGGAGGCAGTTCCCACTTAGGAAAGCTCGAGATGCTGCAGAAGAGACCCTTTCTGGGCTACTTAAAGCCAAGGTTGATGGATTTATGTTGCTTATTGAGAATGTAAATTGGATGGCTGATGAGCCGCCACAGAGTGGAAATGAATATGTAAATGAGGTCATCATTTATTTGGAAATTTTGGTTTCAACTGCTCAACAGATACTGCCAACTCAAGTCCTCAAAAGAGTTCTACAGCAAGTTCTTTCGCACATATCAGAGAAGATTGTTGGGGCTTTAGTTAGTGACTCTGTCAAGAGGTTTAATGTGAATGCTATTATTGGATTTGATGTGGACATCCGGCTTTTAGAACAATTTGCTGATAATCAGGCCTCCCTTTTTGCCGATGGAGATGCTGATGAATTGAAGATGGCGCTTGCTGAGTCAAGGCAATTGGTTAATTTGCTATTAAGCAATCATCCAGAGAACTTCTTGAATGCAGTGATTAGGGAGAGGAGTTACAATACTTTGGACCATAGGAAAGTAGTGATTGTTTCAGAGAAGTTGAGGGATCCTTCTGATCGGCTCTTTGGAACCTTTGGTAGTCGTGGAGCCAGGCAGAATCCAAAGAAGAAATCTCTGGATACATTGATAAAAAGGCTTAAGGATGTTAGCTGA 2238 0.4826 MHSSKPPRRKVAPANGDDSGDKLDQLLLSSAICNNEDLGPFIRKAFASGKPETLLHHLRQFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVDDLKSSLSDSNSKLQSVARPLLSSLDAFVETRNVSRNVNLAIESVHTCVELMEVCSRANRHLAGDNFYMALKCVDTLEREYLEKTPSTTLKRMLERKIPEIRSHIERKVSKEFGDWLVEIRVVSRNLGQLAIGQASAARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEEDDEIAAGSGIGEDGYGNGGGIIAGFFVVEDRVLRTGGGLILKMEVENLWDIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRYGYPIDALLDVLSKHRDKYHELLLSDCRKQIAEALAADKFEQMLMKKEYEYSMNVLSFQIQTSDIVPAFPYVAPFSTTVPDCCRIVRSFIEDSVSFMSYGGQLEFYEIVKKYLDRLLTEVLDEALLKLINTSVSGVPQAMQMAANMTVFERACDFFFRHAAQLSGIPLRMVERSRRQFPLRKARDAAEETLSGLLKAKVDGFMLLIENVNWMADEPPQSGNEYVNEVIIYLEILVSTAQQILPTQVLKRVLQQVLSHISEKIVGALVSDSVKRFNVNAIIGFDVDIRLLEQFADNQASLFADGDADELKMALAESRQLVNLLLSNHPENFLNAVIRERSYNTLDHRKVVIVSEKLRDPSDRLFGTFGSRGARQNPKKKSLDTLIKRLKDVS 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00613 745 PANTHER EXOCYST COMPLEX COMPONENT SEC15B 7 271 - -
Aip06g00613 745 Gene3D - 359 531 IPR042045 -
Aip06g00613 745 PANTHER SEC15 287 745 IPR007225 GO:0006886|GO:0090522
Aip06g00613 745 MobiDBLite consensus disorder prediction 1 21 - -
Aip06g00613 745 PANTHER EXOCYST COMPLEX COMPONENT SEC15B 287 745 - -
Aip06g00613 745 Coils Coil 229 249 - -
Aip06g00613 745 PIRSF Sec15 286 745 IPR007225 GO:0006886|GO:0090522
Aip06g00613 745 PIRSF Sec15 3 273 IPR007225 GO:0006886|GO:0090522
Aip06g00613 745 Pfam Exocyst complex subunit Sec15-like 405 709 IPR046361 -
Aip06g00613 745 PANTHER SEC15 7 271 IPR007225 GO:0006886|GO:0090522
Aip06g00613 745 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 537 684 IPR042044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00613 Aip-Chr6 8019250 8022125 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00613 K19985 - gmx:100796432 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00613 06 8019250 8022125 Aip06g00613 06 8019250 8022125 ECH